Pin the dependencies ...

... after upgrading:
- alembic
- geopy
- googlemaps
- psycopg2
- rpy2
- dev dependencies
  + coverage       + darglint      + flake8      + flake8-annotations
  + flake8-black   + flake8-comprehensions       + flake8-docstrings
  + flake8-pytest-style            + pre-commit  + pytest
  + pytest-cov     + pytest-mock   + sphinx      + sphinx-autodoc-typehints
- research dependencies
  + jupyterlab     + matplotlib    + numpy       + pandas
- transient dependencies
  + argcomplete    + argon2-cffi   + attrs       + babel
  + bleach         + certifi       + cffi        + cfgv
  + chardset-normalizer            + colorlog    + debugpy
  + decorator      + defusedxml    + distlib     + geographiclib
  + gitdb          + gitpython     + greenlet    + identify
  + idna           + importlib-resources         + ipykernel
  + ipython        + jinja2        + json5       + jupyter-client
  + kiwisolver     + mako          + markupsafe
  + nbclient       + nbconvert     + nbformat    + nodeenv
  + notebook       + parso         + pathspec    + pbr
  + pillow         + platformdirs  + pluggy      + prometheus-client
  + prompt-toolkit + pycodestyle   + pydocstyle  + pyflakes
  + pygments       + pyristent     + python-dateutil
  + pywin32        + pywinpty      + pyzmq       + regex
  + requests       + scipy         + send2trash  + six
  + smmap          + sphinxcontrib-htmlhelp
  + sphinxcontrib-serializinghtml  + stevedore   + terminado
  + textfixtures   + testpath      + traitlets   + typed-ast
  + typing-extensions              + tzdata      + tzlocal
  + urllib3        + virtualenv    + zipp