Pin the dependencies ...

... after upgrading:
- alembic
- matplotlib
- pandas
- rpy2
- sqlalchemy
- statsmodels
- dev dependencies
  + coverage     + factory-boy    + faker                 + nox
  + packaging    + pre-commit     + flake8-annotations    + pytest
  + pytest-cov   + sphinx
- research dependencies
  + numpy        + pyty
- transient dependencies
  + astpretty    + atomicwrites   + bleach                + chardet
  + colorlog     + darglint       + flake8-comprehensions + gitpython
  + identify     + ipykernel      + ipython               + jedi
  + jinja2       + jupyter-client + jupyter-core          + mako
  + nbformat     + nest-asyncio   + notebook              + parso
  + pluggy       + prompt-toolkit + ptyprocess            + pygments
  + pyyaml       + pyzmq          + requests              + smmap
  + terminado    + textfixtures   + snowballstemmer       + typed-ast
  + urllib3      + virtualenv

- fix SQL statements written in raw text

src/urban_meal_delivery/db/cities.py

@@ -218,6 +218,7 @@ class City(meta.Base):
         all_zip_codes = sorted(
             row[0]
             for row in db.session.execute(
+                sa.text(
                     f"""  -- # noqa:S608
                     SELECT DISTINCT
                         zip_code
@@ -226,6 +227,7 @@ class City(meta.Base):
                     WHERE
                         city_id = {self.id};
                     """,
+                ),
             )
         )
         cmap = utils.make_random_cmap(len(all_zip_codes), bright=False)

src/urban_meal_delivery/forecasts/timify.py

@@ -6,6 +6,7 @@ import datetime as dt
 from typing import Tuple
 
 import pandas as pd
+import sqlalchemy as sa
 
 from urban_meal_delivery import config
 from urban_meal_delivery import db
@@ -68,7 +69,8 @@ class OrderHistory:
         # `data` is probably missing "pixel_id"-"start_at" pairs.
         # This happens when there is no demand in the `Pixel` in the given `time_step`.
         data = pd.read_sql_query(
-            f"""-- # noqa:E501,WPS221
+            sa.text(
+                f"""  -- # noqa:WPS221
                 SELECT
                     pixel_id,
                     start_at,
@@ -80,9 +82,11 @@ class OrderHistory:
                     FROM (
                         SELECT
                             pixels.pixel_id,
-                        DATE_TRUNC('MINUTE', orders.placed_at) AS placed_at_without_seconds,
+                            DATE_TRUNC('MINUTE', orders.placed_at)
+                                AS placed_at_without_seconds,
                             ((
-                            EXTRACT(MINUTES FROM orders.placed_at)::INTEGER % {self._time_step}
+                                EXTRACT(MINUTES FROM orders.placed_at)::INTEGER
+                                    % {self._time_step}
                             )::TEXT || ' MINUTES')::INTERVAL
                                 AS minutes_to_be_cut
                         FROM (
@@ -114,7 +118,7 @@ class OrderHistory:
                             WHERE
                                 grid_id = {self._grid.id}
                                 AND
-                            city_id = {self._grid.city.id} -- redundant -> sanity check
+                                city_id = {self._grid.city.id} -- -> sanity check
                         ) AS pixels
                             ON orders.pickup_address_id = pixels.address_id
                     ) AS placed_at_aggregated_into_start_at
@@ -126,6 +130,7 @@ class OrderHistory:
                     pixel_id,
                     start_at;
                 """,
+            ),  # noqa:WPS355
             con=db.connection,
             index_col=['pixel_id', 'start_at'],
         )