From b0f2fdde101703cbb77a6476885b4c68055d731e Mon Sep 17 00:00:00 2001 From: Alexander Hess Date: Mon, 11 Jan 2021 12:24:15 +0100 Subject: [PATCH] Add rpy2 to the dependencies - add a Jupyter notebook that allows to install all project-external dependencies regarding R and R packages - adjust the GitHub Action workflow to also install R and the R packages used within the project - add a `init_r` module that initializes all R packages globally once the `urban_meal_delivery` package is imported --- .github/workflows/tests.yml | 24 +- noxfile.py | 135 +- poetry.lock | 54 +- pyproject.toml | 1 + research/r_dependencies.ipynb | 1868 ++++++++++++++++++++++ setup.cfg | 7 +- src/urban_meal_delivery/configuration.py | 8 + src/urban_meal_delivery/init_r.py | 28 + tests/test_config.py | 60 + tests/test_init_r.py | 19 + 10 files changed, 2152 insertions(+), 52 deletions(-) create mode 100644 research/r_dependencies.ipynb create mode 100644 src/urban_meal_delivery/init_r.py create mode 100644 tests/test_init_r.py diff --git a/.github/workflows/tests.yml b/.github/workflows/tests.yml index 0724c09..bdf77e9 100644 --- a/.github/workflows/tests.yml +++ b/.github/workflows/tests.yml @@ -1,7 +1,8 @@ name: CI on: push jobs: - tests: + fast-tests: + name: fast (without R) runs-on: ubuntu-latest steps: - uses: actions/checkout@v2 @@ -10,5 +11,22 @@ jobs: python-version: 3.8 architecture: x64 - run: pip install nox==2020.5.24 - - run: pip install poetry==1.0.10 - - run: nox + - run: pip install poetry==1.1.4 + - run: nox -s format lint ci-tests-fast safety docs + slow-tests: + name: slow (with R) + runs-on: ubuntu-latest + env: + R_LIBS: .r_libs + steps: + - uses: actions/checkout@v2 + - uses: actions/setup-python@v1 + with: + python-version: 3.8 + architecture: x64 + - run: mkdir .r_libs + - run: sudo apt-get install r-base r-base-dev libcurl4-openssl-dev libxml2-dev patchelf + - run: R -e "install.packages('forecast')" + - run: pip install nox==2020.5.24 + - run: pip install poetry==1.1.4 + - run: nox -s ci-tests-slow diff --git a/noxfile.py b/noxfile.py index 617f4c6..474bb65 100644 --- a/noxfile.py +++ b/noxfile.py @@ -25,26 +25,6 @@ as unified tasks to assure the quality of the source code: + accepts extra arguments, e.g., `poetry run nox -s test -- --no-cov`, that are passed on to `pytest` and `xdoctest` with no changes => may be paths or options - - -GitHub Actions implements the following CI workflow: - -- "format", "lint", and "test" as above - -- "safety": check if dependencies contain known security vulnerabilites - -- "docs": build the documentation with sphinx - - -The pre-commit framework invokes the following tasks: - -- before any commit: - - + "format" and "lint" as above - + "fix-branch-references": replace branch references with the current one - -- before merges: run the entire "test-suite" independent of the file changes - """ import contextlib @@ -92,7 +72,7 @@ nox.options.envdir = '.cache/nox' # Avoid accidental successes if the environment is not set up properly. nox.options.error_on_external_run = True -# Run only CI related checks by default. +# Run only local checks by default. nox.options.sessions = ( 'format', 'lint', @@ -220,24 +200,50 @@ def test(session): 'xdoctest[optional]', ) + session.run('pytest', '--version') + + # When the CI server runs the slow tests, we only execute the R related + # test cases that require the slow installation of R and some packages. + if session.env.get('_slow_ci_tests'): + session.run( + 'pytest', '--randomly-seed=4287', '-m', 'r', PYTEST_LOCATION, + ) + + # In the "ci-tests-slow" session, we do not run any test tool + # other than pytest. So, xdoctest, for example, is only run + # locally or in the "ci-tests-fast" session. + return + + # When the CI server executes pytest, no database is available. + # Therefore, the CI server does not measure coverage. + elif session.env.get('_fast_ci_tests'): + pytest_args = ( + '--randomly-seed=4287', + '-m', + 'not (db or r)', + PYTEST_LOCATION, + ) + + # When pytest is executed in the local develop environment, + # both R and a database are available. + # Therefore, we require 100% coverage. + else: + pytest_args = ( + '--cov', + '--no-cov-on-fail', + '--cov-branch', + '--cov-fail-under=100', + '--cov-report=term-missing:skip-covered', + '--randomly-seed=4287', + PYTEST_LOCATION, + ) + # Interpret extra arguments as options for pytest. - # They are "dropped" by the hack in the pre_merge() function - # if this function is run within the "pre-merge" session. + # They are "dropped" by the hack in the test_suite() function + # if this function is run within the "test-suite" session. posargs = () if session.env.get('_drop_posargs') else session.posargs - args = posargs or ( - '--cov', - '--no-cov-on-fail', - '--cov-branch', - '--cov-fail-under=100', - '--cov-report=term-missing:skip-covered', - '--randomly-seed=4287', - '-m', - 'not (db or e2e)', - PYTEST_LOCATION, - ) - session.run('pytest', '--version') - session.run('pytest', *args) + session.run('pytest', *(posargs or pytest_args)) # For xdoctest, the default arguments are different from pytest. args = posargs or [PACKAGE_IMPORT_NAME] @@ -301,6 +307,60 @@ def docs(session): print(f'Docs are available at {os.getcwd()}/{DOCS_BUILD}index.html') # noqa:WPS421 +@nox.session(name='ci-tests-fast', python=PYTHON) +def fast_ci_tests(session): + """Fast tests run by the GitHub Actions CI server. + + These regards all test cases NOT involving R via `rpy2`. + + Also, coverage is not measured as full coverage can only be + achieved by running the tests in the local develop environment + that has access to a database. + """ + # Re-using an old environment is not so easy here as the "test" session + # runs `poetry install --no-dev`, which removes previously installed packages. + if session.virtualenv.reuse_existing: + raise RuntimeError( + 'The "ci-tests-fast" session must be run without the "-r" option', + ) + + # Little hack to pass arguments to the "test" session. + session.env['_fast_ci_tests'] = 'true' + + # Cannot use session.notify() to trigger the "test" session + # as that would create a new Session object without the flag + # in the env(ironment). + test(session) + + +@nox.session(name='ci-tests-slow', python=PYTHON) +def slow_ci_tests(session): + """Slow tests run by the GitHub Actions CI server. + + These regards all test cases involving R via `rpy2`. + They are slow as the CI server needs to install R and some packages + first, which takes a couple of minutes. + + Also, coverage is not measured as full coverage can only be + achieved by running the tests in the local develop environment + that has access to a database. + """ + # Re-using an old environment is not so easy here as the "test" session + # runs `poetry install --no-dev`, which removes previously installed packages. + if session.virtualenv.reuse_existing: + raise RuntimeError( + 'The "ci-tests-slow" session must be run without the "-r" option', + ) + + # Little hack to pass arguments to the "test" session. + session.env['_slow_ci_tests'] = 'true' + + # Cannot use session.notify() to trigger the "test" session + # as that would create a new Session object without the flag + # in the env(ironment). + test(session) + + @nox.session(name='test-suite', python=PYTHON) def test_suite(session): """Run the entire test suite. @@ -324,8 +384,7 @@ def test_suite(session): # Cannot use session.notify() to trigger the "test" session # as that would create a new Session object without the flag - # in the env(ironment). Instead, run the test() function within - # the "pre-merge" session. + # in the env(ironment). test(session) diff --git a/poetry.lock b/poetry.lock index 7cf1b5a..9c12400 100644 --- a/poetry.lock +++ b/poetry.lock @@ -95,7 +95,7 @@ python-versions = ">=3.5" name = "atomicwrites" version = "1.4.0" description = "Atomic file writes." -category = "dev" +category = "main" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*" @@ -204,7 +204,7 @@ name = "cffi" version = "1.14.4" description = "Foreign Function Interface for Python calling C code." category = "main" -optional = true +optional = false python-versions = "*" [package.dependencies] @@ -660,7 +660,7 @@ python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*" name = "iniconfig" version = "1.1.1" description = "iniconfig: brain-dead simple config-ini parsing" -category = "dev" +category = "main" optional = false python-versions = "*" @@ -1080,7 +1080,7 @@ name = "numpy" version = "1.19.4" description = "NumPy is the fundamental package for array computing with Python." category = "main" -optional = true +optional = false python-versions = ">=3.6" [[package]] @@ -1179,7 +1179,7 @@ python-versions = "*" name = "pluggy" version = "0.13.1" description = "plugin and hook calling mechanisms for python" -category = "dev" +category = "main" optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*" @@ -1261,7 +1261,7 @@ name = "pycparser" version = "2.20" description = "C parser in Python" category = "main" -optional = true +optional = false python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*" [[package]] @@ -1311,7 +1311,7 @@ python-versions = ">=3.5" name = "pytest" version = "6.2.1" description = "pytest: simple powerful testing with Python" -category = "dev" +category = "main" optional = false python-versions = ">=3.6" @@ -1465,6 +1465,21 @@ python-versions = "*" [package.dependencies] docutils = ">=0.11,<1.0" +[[package]] +name = "rpy2" +version = "3.4.1" +description = "Python interface to the R language (embedded R)" +category = "main" +optional = false +python-versions = "*" + +[package.dependencies] +cffi = ">=1.10.0" +jinja2 = "*" +pytest = "*" +pytz = "*" +tzlocal = "*" + [[package]] name = "send2trash" version = "1.5.0" @@ -1707,7 +1722,7 @@ python-versions = "*" name = "toml" version = "0.10.2" description = "Python Library for Tom's Obvious, Minimal Language" -category = "dev" +category = "main" optional = false python-versions = ">=2.6, !=3.0.*, !=3.1.*, !=3.2.*" @@ -1749,6 +1764,17 @@ category = "dev" optional = false python-versions = "*" +[[package]] +name = "tzlocal" +version = "2.1" +description = "tzinfo object for the local timezone" +category = "main" +optional = false +python-versions = "*" + +[package.dependencies] +pytz = "*" + [[package]] name = "urllib3" version = "1.26.2" @@ -1857,7 +1883,7 @@ research = ["jupyterlab", "nb_black", "numpy", "pytz"] [metadata] lock-version = "1.1" python-versions = "^3.8" -content-hash = "5c0a4b37e73e0ed607cc2c46a9178f7b8e2a8364856a408a80f955a3c8b861a1" +content-hash = "9be7d168525c85958389c8edb4686567cbb4de0e8780168b91e387e1b0581ec3" [metadata.files] alabaster = [ @@ -2643,6 +2669,12 @@ requests = [ restructuredtext-lint = [ {file = "restructuredtext_lint-1.3.2.tar.gz", hash = "sha256:d3b10a1fe2ecac537e51ae6d151b223b78de9fafdd50e5eb6b08c243df173c80"}, ] +rpy2 = [ + {file = "rpy2-3.4.1-cp36-cp36m-macosx_10_14_x86_64.whl", hash = "sha256:3f2d56bc80c2af0fe8118c53da7fd29f1809bc159a88cb10f9e2869321a21deb"}, + {file = "rpy2-3.4.1-cp37-cp37m-macosx_10_14_x86_64.whl", hash = "sha256:344ac89c966b2ec91bbf9e623b7ff9c121820b5e53da2ffc75fa10f158023cd7"}, + {file = "rpy2-3.4.1-cp38-cp38-macosx_10_14_x86_64.whl", hash = "sha256:ebbd7fceef359279f56b481d7ea2dd60db91928abb3726010a88fbb3362213af"}, + {file = "rpy2-3.4.1.tar.gz", hash = "sha256:644360b569656700dfe13f59878ec1cf8c116c128d4f2f0bf96144031f95d2e2"}, +] send2trash = [ {file = "Send2Trash-1.5.0-py3-none-any.whl", hash = "sha256:f1691922577b6fa12821234aeb57599d887c4900b9ca537948d2dac34aea888b"}, {file = "Send2Trash-1.5.0.tar.gz", hash = "sha256:60001cc07d707fe247c94f74ca6ac0d3255aabcb930529690897ca2a39db28b2"}, @@ -2863,6 +2895,10 @@ typing-extensions = [ {file = "typing_extensions-3.7.4.3-py3-none-any.whl", hash = "sha256:7cb407020f00f7bfc3cb3e7881628838e69d8f3fcab2f64742a5e76b2f841918"}, {file = "typing_extensions-3.7.4.3.tar.gz", hash = "sha256:99d4073b617d30288f569d3f13d2bd7548c3a7e4c8de87db09a9d29bb3a4a60c"}, ] +tzlocal = [ + {file = "tzlocal-2.1-py2.py3-none-any.whl", hash = "sha256:e2cb6c6b5b604af38597403e9852872d7f534962ae2954c7f35efcb1ccacf4a4"}, + {file = "tzlocal-2.1.tar.gz", hash = "sha256:643c97c5294aedc737780a49d9df30889321cbe1204eac2c2ec6134035a92e44"}, +] urllib3 = [ {file = "urllib3-1.26.2-py2.py3-none-any.whl", hash = "sha256:d8ff90d979214d7b4f8ce956e80f4028fc6860e4431f731ea4a8c08f23f99473"}, {file = "urllib3-1.26.2.tar.gz", hash = "sha256:19188f96923873c92ccb987120ec4acaa12f0461fa9ce5d3d0772bc965a39e08"}, diff --git a/pyproject.toml b/pyproject.toml index 3545e95..2cd8747 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -42,6 +42,7 @@ jupyterlab = { version="^2.2.2", optional=true } nb_black = { version="^1.0.7", optional=true } numpy = { version="^1.19.1", optional=true } pytz = { version="^2020.1", optional=true } +rpy2 = "^3.4.1" [tool.poetry.extras] research = [ diff --git a/research/r_dependencies.ipynb b/research/r_dependencies.ipynb new file mode 100644 index 0000000..e2e1dc6 --- /dev/null +++ b/research/r_dependencies.ipynb @@ -0,0 +1,1868 @@ +{ + "cells": [ + { + "cell_type": "markdown", + "metadata": {}, + "source": [ + "## R Dependencies\n", + "\n", + "This notebook installs R and the R packages needed to perform all the calculations throughout this project into a project-local sub-folder.\n", + "\n", + "**Note:** This notebook requires sudo privileges to install R and assumes a Ubuntu/Debian based system!\n", + "\n", + "**Important:** Once any notebook first imports anything from the `rpy2` site package, a new R process is spawned off and used to run all calls to R via `rpy2`. In order for this process to use the project-local sub-folder for the R dependencies, an environment variable `R_LIBS` must be set (with the path to this sub-folder) **before** any interaction with `rpy2`." + ] + }, + { + "cell_type": "code", + "execution_count": 1, + "metadata": {}, + "outputs": [], + "source": [ + "import getpass\n", + "import os\n", + "import shutil" + ] + }, + { + "cell_type": "markdown", + "metadata": {}, + "source": [ + "Obtain the sudo password." + ] + }, + { + "cell_type": "code", + "execution_count": 2, + "metadata": {}, + "outputs": [ + { + "name": "stdin", + "output_type": "stream", + "text": [ + " ············\n" + ] + } + ], + "source": [ + "password = getpass.getpass()" + ] + }, + { + "cell_type": "markdown", + "metadata": {}, + "source": [ + "Install the packages *r-base r-base-dev libcurl4-openssl-dev libxml2-dev patchelf*" + ] + }, + { + "cell_type": "code", + "execution_count": 3, + "metadata": {}, + "outputs": [], + "source": [ + "os.system(\n", + " f\"echo {password} | sudo -S apt-get -y install\"\n", + " \" r-base r-base-dev libcurl4-openssl-dev libxml2-dev patchelf\"\n", + ");" + ] + }, + { + "cell_type": "markdown", + "metadata": {}, + "source": [ + "Create a (hidden) folder in the project's root directory to install the R libraries into." + ] + }, + { + "cell_type": "code", + "execution_count": 4, + "metadata": {}, + "outputs": [ + { + "name": "stdout", + "output_type": "stream", + "text": [ + "/home/webartifex/repos/urban-meal-delivery\n" + ] + } + ], + "source": [ + "%cd .." + ] + }, + { + "cell_type": "code", + "execution_count": 5, + "metadata": {}, + "outputs": [], + "source": [ + "# Sanity check to see if the R_LIBS variable is set.\n", + "assert os.getenv(\"R_LIBS\")\n", + "# Expand the R_LIBS path to an absolute path.\n", + "r_libs_path = os.path.join(os.getcwd(), os.environ[\"R_LIBS\"])" + ] + }, + { + "cell_type": "code", + "execution_count": 6, + "metadata": {}, + "outputs": [], + "source": [ + "# Create a fresh folder for the R dependencies.\n", + "try:\n", + " shutil.rmtree(r_libs_path)\n", + "except FileNotFoundError:\n", + " pass\n", + "os.mkdir(r_libs_path)" + ] + }, + { + "cell_type": "code", + "execution_count": 7, + "metadata": { + "scrolled": true + }, + "outputs": [ + { + "name": "stdout", + "output_type": "stream", + "text": [ + "\n", + "R version 4.0.2 (2020-06-22) -- \"Taking Off Again\"\n", + "Copyright (C) 2020 The R Foundation for Statistical Computing\n", + "Platform: x86_64-pc-linux-gnu (64-bit)\n", + "\n", + "R is free software and comes with ABSOLUTELY NO WARRANTY.\n", + "You are welcome to redistribute it under certain conditions.\n", + "Type 'license()' or 'licence()' for distribution details.\n", + "\n", + " Natural language support but running in an English locale\n", + "\n", + "R is a collaborative project with many contributors.\n", + "Type 'contributors()' for more information and\n", + "'citation()' on how to cite R or R packages in publications.\n", + "\n", + "Type 'demo()' for some demos, 'help()' for on-line help, or\n", + "'help.start()' for an HTML browser interface to help.\n", + "Type 'q()' to quit R.\n", + "\n", + "> install.packages('forecast')\n", + "Installing package into ‘/home/webartifex/repos/urban-meal-delivery/.cache/r_libs’\n", + "(as ‘lib’ is unspecified)\n", + "also installing the dependencies ‘prettyunits’, ‘rprojroot’, ‘pkgbuild’, ‘rstudioapi’, ‘diffobj’, ‘rematch2’, ‘brio’, ‘callr’, ‘desc’, ‘evaluate’, ‘jsonlite’, ‘pkgload’, ‘praise’, ‘processx’, ‘ps’, ‘waldo’, ‘assertthat’, ‘utf8’, ‘testthat’, ‘farver’, ‘labeling’, ‘lifecycle’, ‘munsell’, ‘R6’, ‘RColorBrewer’, ‘viridisLite’, ‘cli’, ‘crayon’, ‘ellipsis’, ‘fansi’, ‘pillar’, ‘pkgconfig’, ‘vctrs’, ‘xts’, ‘TTR’, ‘curl’, ‘digest’, ‘glue’, ‘gtable’, ‘isoband’, ‘rlang’, ‘scales’, ‘tibble’, ‘withr’, ‘quadprog’, ‘quantmod’, ‘colorspace’, ‘fracdiff’, ‘ggplot2’, ‘lmtest’, ‘magrittr’, ‘Rcpp’, ‘timeDate’, ‘tseries’, ‘urca’, ‘zoo’, ‘RcppArmadillo’\n", + "\n", + "trying URL 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record of temporary installation path\n", + "* DONE (prettyunits)\n", + "* installing *source* package ‘rprojroot’ ...\n", + "** package ‘rprojroot’ successfully unpacked and MD5 sums checked\n", + "** using staged installation\n", + "** R\n", + "** inst\n", + "** byte-compile and prepare package for lazy loading\n", + "** help\n", + "*** installing help indices\n", + "*** copying figures\n", + "** building package indices\n", + "** installing vignettes\n", + "** testing if installed package can be loaded from temporary location\n", + "** testing if installed package can be loaded from final location\n", + "** testing if installed package keeps a record of temporary installation path\n", + "* DONE (rprojroot)\n", + "* installing *source* package ‘rstudioapi’ ...\n", + "** package ‘rstudioapi’ successfully unpacked and MD5 sums checked\n", + "** using staged installation\n", + "** R\n", + "** inst\n", + "** byte-compile and prepare package for lazy loading\n", + "** help\n", + "*** installing help indices\n", + "*** copying figures\n", + "** building package indices\n", + "** installing vignettes\n", + "** testing if installed package can be loaded from temporary location\n", + "** testing if installed package can be loaded from final location\n", + "** testing if installed package keeps a record of temporary installation path\n", + "* DONE (rstudioapi)\n", + "* installing *source* package ‘brio’ ...\n", + "** package ‘brio’ successfully unpacked and MD5 sums checked\n", + "** using staged installation\n", + "** libs\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c brio.c -o brio.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 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indices\n", + "** building package indices\n", + "** testing if installed package can be loaded from temporary location\n", + "** checking absolute paths in shared objects and dynamic libraries\n", + "** testing if installed package can be loaded from final location\n", + "** testing if installed package keeps a record of temporary installation path\n", + "* DONE (brio)\n", + "* installing *source* package ‘evaluate’ ...\n", + "** package ‘evaluate’ successfully unpacked and MD5 sums checked\n", + "** using staged installation\n", + "** R\n", + "** byte-compile and prepare package for lazy loading\n", + "** help\n", + "*** installing help indices\n", + "** building package indices\n", + "** testing if installed package can be loaded from temporary location\n", + "** testing if installed package can be loaded from final location\n", + "** testing if installed package keeps a record of temporary installation path\n", + "* DONE (evaluate)\n", + "* installing *source* package ‘jsonlite’ ...\n", + "** package ‘jsonlite’ successfully unpacked and MD5 sums checked\n", + "** using staged installation\n", + "** libs\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -Iyajl/api -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c base64.c -o base64.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -Iyajl/api -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c collapse_array.c -o collapse_array.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -Iyajl/api -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c collapse_object.c -o collapse_object.o\n", + "gcc 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register.c -o register.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -Iyajl/api -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c row_collapse.c -o row_collapse.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -Iyajl/api -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c transpose_list.c -o transpose_list.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -Iyajl/api -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c validate.c -o validate.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -Iyajl/api -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c yajl/yajl.c -o yajl/yajl.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -Iyajl/api -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c yajl/yajl_alloc.c -o yajl/yajl_alloc.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -Iyajl/api -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c yajl/yajl_buf.c -o yajl/yajl_buf.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -Iyajl/api -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c yajl/yajl_encode.c -o yajl/yajl_encode.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -Iyajl/api -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c yajl/yajl_gen.c -o yajl/yajl_gen.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -Iyajl/api -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c yajl/yajl_lex.c -o yajl/yajl_lex.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -Iyajl/api -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c yajl/yajl_parser.c -o yajl/yajl_parser.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -Iyajl/api -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c yajl/yajl_tree.c -o yajl/yajl_tree.o\n", + "ar rcs yajl/libstatyajl.a yajl/yajl.o yajl/yajl_alloc.o yajl/yajl_buf.o yajl/yajl_encode.o yajl/yajl_gen.o yajl/yajl_lex.o yajl/yajl_parser.o yajl/yajl_tree.o\n", + "gcc -std=gnu99 -shared -L/usr/lib/R/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -o jsonlite.so base64.o collapse_array.o collapse_object.o collapse_pretty.o escape_chars.o integer64_to_na.o is_datelist.o is_recordlist.o is_scalarlist.o modp_numtoa.o null_to_na.o num_to_char.o parse.o prettify.o push_parser.o r-base64.o register.o row_collapse.o transpose_list.o validate.o -Lyajl -lstatyajl -L/usr/lib/R/lib -lR\n", + "installing to /home/webartifex/repos/urban-meal-delivery/.cache/r_libs/00LOCK-jsonlite/00new/jsonlite/libs\n", + "** R\n", + "** inst\n", + "** byte-compile and prepare package for lazy loading\n", + "in method for ‘asJSON’ with signature ‘\"blob\"’: no definition for class “blob”\n", + "** help\n", + "*** installing help indices\n", + "** building package indices\n", + "** installing vignettes\n", + "** testing if installed package can be loaded from temporary location\n", + "** checking absolute paths in shared objects and dynamic libraries\n", + "** testing if installed package can be loaded from final location\n", + "** testing if installed package keeps a record of temporary installation path\n", + "* DONE (jsonlite)\n", + "* installing *source* package ‘praise’ ...\n", + "** package ‘praise’ successfully unpacked and MD5 sums checked\n", + "** using staged installation\n", + "** R\n", + "** inst\n", + "** byte-compile and prepare package for lazy loading\n", + "** help\n", + "*** installing help indices\n", + "** building package indices\n", + "** testing if installed package can be loaded from temporary location\n", + "** testing if installed package can be loaded from final location\n", + "** testing if installed package keeps a record of temporary installation path\n", + "* DONE (praise)\n", + "* installing *source* package ‘ps’ ...\n", + "** package ‘ps’ successfully unpacked and MD5 sums checked\n", + "** using staged installation\n", + "** libs\n", + "gcc -std=gnu99 -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wall px.c -o px\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c init.c -o init.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c api-common.c -o api-common.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c common.c -o common.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c extra.c -o extra.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c dummy.c -o dummy.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c error-codes.c -o error-codes.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c posix.c -o posix.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c api-posix.c -o api-posix.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c linux.c -o linux.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c api-linux.c -o api-linux.o\n", + "gcc -std=gnu99 -shared -L/usr/lib/R/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -o ps.so init.o api-common.o common.o extra.o dummy.o error-codes.o posix.o api-posix.o linux.o api-linux.o -L/usr/lib/R/lib -lR\n", + "installing via 'install.libs.R' to /home/webartifex/repos/urban-meal-delivery/.cache/r_libs/00LOCK-ps/00new/ps\n", + "** R\n", + "** inst\n", + "** byte-compile and prepare package for lazy loading\n", + "** help\n", + "*** installing help indices\n", + "** building package indices\n", + "** testing if installed package can be loaded from temporary location\n", + "** checking absolute paths in shared objects and dynamic libraries\n", + "** testing if installed package can be loaded from final location\n", + "** testing if installed package keeps a record of temporary installation path\n", + "* DONE (ps)\n", + "* installing *source* package ‘assertthat’ ...\n", + "** package ‘assertthat’ successfully unpacked and MD5 sums checked\n", + "** using staged installation\n", + "** R\n", + "** byte-compile and prepare package for lazy loading\n", + "** help\n", + "*** installing help indices\n", + "** building package indices\n", + "** testing if installed package can be loaded from temporary location\n", + "** testing if installed package can be loaded from final location\n", + "** testing if installed package keeps a record of temporary installation path\n", + "* DONE (assertthat)\n", + "* installing *source* package ‘utf8’ ...\n", + "** package ‘utf8’ successfully unpacked and MD5 sums checked\n", + "** using staged installation\n", + "** libs\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -Iutf8lite/src -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c as_utf8.c -o as_utf8.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -Iutf8lite/src -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c bytes.c -o bytes.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -Iutf8lite/src -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c context.c -o context.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -Iutf8lite/src -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c init.c -o init.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -Iutf8lite/src -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c render.c -o render.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -Iutf8lite/src -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c render_table.c -o render_table.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -Iutf8lite/src -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c string.c -o string.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -Iutf8lite/src -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c text.c -o text.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -Iutf8lite/src -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c utf8_encode.c -o utf8_encode.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -Iutf8lite/src -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c utf8_format.c -o utf8_format.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -Iutf8lite/src -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c utf8_normalize.c -o utf8_normalize.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -Iutf8lite/src -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c utf8_valid.c -o utf8_valid.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -Iutf8lite/src -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c utf8_width.c -o utf8_width.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -Iutf8lite/src -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c util.c -o util.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -Iutf8lite/src -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c utf8lite/src/array.c -o utf8lite/src/array.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -Iutf8lite/src -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c utf8lite/src/char.c -o utf8lite/src/char.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -Iutf8lite/src -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c utf8lite/src/encode.c -o utf8lite/src/encode.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -Iutf8lite/src -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c utf8lite/src/error.c -o utf8lite/src/error.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -Iutf8lite/src -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c utf8lite/src/escape.c -o utf8lite/src/escape.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -Iutf8lite/src -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c utf8lite/src/graph.c -o utf8lite/src/graph.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -Iutf8lite/src -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c utf8lite/src/graphscan.c -o utf8lite/src/graphscan.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -Iutf8lite/src -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c utf8lite/src/normalize.c -o utf8lite/src/normalize.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -Iutf8lite/src -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c utf8lite/src/render.c -o utf8lite/src/render.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -Iutf8lite/src -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c utf8lite/src/text.c -o utf8lite/src/text.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -Iutf8lite/src -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c utf8lite/src/textassign.c -o utf8lite/src/textassign.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -Iutf8lite/src -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c utf8lite/src/textiter.c -o utf8lite/src/textiter.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -Iutf8lite/src -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c utf8lite/src/textmap.c -o utf8lite/src/textmap.o\n", + "ar rcs libcutf8lite.a utf8lite/src/array.o utf8lite/src/char.o utf8lite/src/encode.o utf8lite/src/error.o utf8lite/src/escape.o utf8lite/src/graph.o utf8lite/src/graphscan.o utf8lite/src/normalize.o utf8lite/src/render.o utf8lite/src/text.o utf8lite/src/textassign.o utf8lite/src/textiter.o utf8lite/src/textmap.o\n", + "gcc -std=gnu99 -shared -L/usr/lib/R/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -o utf8.so as_utf8.o bytes.o context.o init.o render.o render_table.o string.o text.o utf8_encode.o utf8_format.o utf8_normalize.o utf8_valid.o utf8_width.o util.o -L. -lcutf8lite -L/usr/lib/R/lib -lR\n", + "installing to /home/webartifex/repos/urban-meal-delivery/.cache/r_libs/00LOCK-utf8/00new/utf8/libs\n", + "** R\n", + "** inst\n", + "** byte-compile and prepare package for lazy loading\n", + "** help\n", + "*** installing help indices\n", + "** building package indices\n", + "** installing vignettes\n", + "** testing if installed package can be loaded from temporary location\n", + "** checking absolute paths in shared objects and dynamic libraries\n", + "** testing if installed package can be loaded from final location\n", + "** testing if installed package keeps a record of temporary installation path\n", + "* DONE (utf8)\n", + "* installing *source* package ‘farver’ ...\n", + "** package ‘farver’ successfully unpacked and MD5 sums checked\n", + "** using staged installation\n", + "** libs\n", + "g++ -std=gnu++11 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c ColorSpace.cpp -o ColorSpace.o\n", + "g++ -std=gnu++11 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c Comparison.cpp -o Comparison.o\n", + "g++ -std=gnu++11 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c Conversion.cpp -o Conversion.o\n", + "g++ -std=gnu++11 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c encode.cpp -o encode.o\n", + "g++ -std=gnu++11 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c farver.cpp -o farver.o\n", + "g++ -std=gnu++11 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c init.cpp -o init.o\n", + "g++ -std=gnu++11 -shared -L/usr/lib/R/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -o farver.so ColorSpace.o Comparison.o Conversion.o encode.o farver.o init.o -L/usr/lib/R/lib -lR\n", + "installing to /home/webartifex/repos/urban-meal-delivery/.cache/r_libs/00LOCK-farver/00new/farver/libs\n", + "** R\n", + "** byte-compile and prepare package for lazy loading\n", + "** help\n", + "*** installing help indices\n", + "*** copying figures\n", + "** building package indices\n", + "** testing if installed package can be loaded from temporary location\n", + "** checking absolute paths in shared objects and dynamic libraries\n", + "** testing if installed package can be loaded from final location\n", + "** testing if installed package keeps a record of temporary installation path\n", + "* DONE (farver)\n", + "* installing *source* package ‘labeling’ ...\n", + "** package ‘labeling’ successfully unpacked and MD5 sums checked\n", + "** using staged installation\n", + "** R\n", + "** byte-compile and prepare package for lazy loading\n", + "** help\n", + "*** installing help indices\n", + "** building package indices\n", + "** testing if installed package can be loaded from temporary location\n", + "** testing if installed package can be loaded from final location\n", + "** testing if installed package keeps a record of temporary installation path\n", + "* DONE (labeling)\n", + "* installing *source* package ‘R6’ ...\n", + "** package ‘R6’ successfully unpacked and MD5 sums checked\n", + "** using staged installation\n", + "** R\n", + "** byte-compile and prepare package for lazy loading\n", + "** help\n", + "*** installing help indices\n", + "*** copying figures\n", + "** building package indices\n", + "** testing if installed package can be loaded from temporary location\n", + "** testing if installed package can be loaded from final location\n", + "** testing if installed package keeps a record of temporary installation path\n", + "* DONE (R6)\n", + "* installing *source* package ‘RColorBrewer’ ...\n", + "** package ‘RColorBrewer’ successfully unpacked and MD5 sums checked\n", + "** using staged installation\n", + "** R\n", + "** inst\n", + "** byte-compile and prepare package for lazy loading\n", + "** help\n", + "*** installing help indices\n", + "** building package indices\n", + "** testing if installed package can be loaded from temporary location\n", + "** testing if installed package can be loaded from final location\n", + "** testing if installed package keeps a record of temporary installation path\n", + "* DONE (RColorBrewer)\n", + "* installing *source* package ‘viridisLite’ ...\n", + "** package ‘viridisLite’ successfully unpacked and MD5 sums checked\n", + "** using staged installation\n", + "** R\n", + "** data\n", + "*** moving datasets to lazyload DB\n", + "** byte-compile and prepare package for lazy loading\n", + "** help\n", + "*** installing help indices\n", + "*** copying figures\n", + "** building package indices\n", + "** testing if installed package can be loaded from temporary location\n", + "** testing if installed package can be loaded from final location\n", + "** testing if installed package keeps a record of temporary installation path\n", + "* DONE (viridisLite)\n", + "* installing *source* package ‘crayon’ ...\n", + "** package ‘crayon’ successfully unpacked and MD5 sums checked\n", + "** using staged installation\n", + "** R\n", + "** inst\n", + "** byte-compile and prepare package for lazy loading\n", + "** help\n", + "*** installing help indices\n", + "** building package indices\n", + "** testing if installed package can be loaded from temporary location\n", + "** testing if installed package can be loaded from final location\n", + "** testing if installed package keeps a record of temporary installation path\n", + "* DONE (crayon)\n", + "* installing *source* package ‘fansi’ ...\n", + "** package ‘fansi’ successfully unpacked and MD5 sums checked\n", + "** using staged installation\n", + "** libs\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c assumptions.c -o assumptions.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c has.c -o has.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c init.c -o init.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c nchar.c -o nchar.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c read.c -o read.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c rnchar.c -o rnchar.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c state.c -o state.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c strip.c -o strip.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c strsplit.c -o strsplit.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c tabs.c -o tabs.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c tohtml.c -o tohtml.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c unhandled.c -o unhandled.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c unique.c -o unique.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c utf8.c -o utf8.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c utils.c -o utils.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c wrap.c -o wrap.o\n", + "gcc -std=gnu99 -shared -L/usr/lib/R/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -o fansi.so assumptions.o has.o init.o nchar.o read.o rnchar.o state.o strip.o strsplit.o tabs.o tohtml.o unhandled.o unique.o utf8.o utils.o wrap.o -L/usr/lib/R/lib -lR\n", + "installing to /home/webartifex/repos/urban-meal-delivery/.cache/r_libs/00LOCK-fansi/00new/fansi/libs\n", + "** R\n", + "** inst\n", + "** byte-compile and prepare package for lazy loading\n", + "** help\n", + "*** installing help indices\n", + "** building package indices\n", + "** installing vignettes\n", + "** testing if installed package can be loaded from temporary location\n", + "** checking absolute paths in shared objects and dynamic libraries\n", + "** testing if installed package can be loaded from final location\n", + "** testing if installed package keeps a record of temporary installation path\n", + "* DONE (fansi)\n", + "* installing *source* package ‘pkgconfig’ ...\n", + "** package ‘pkgconfig’ successfully unpacked and MD5 sums checked\n", + "** using staged installation\n", + "** R\n", + "** inst\n", + "** byte-compile and prepare package for lazy loading\n", + "** help\n", + "*** installing help indices\n", + "** building package indices\n", + "** testing if installed package can be loaded from temporary location\n", + "** testing if installed package can be loaded from final location\n", + "** testing if installed package keeps a record of temporary installation path\n", + "* DONE (pkgconfig)\n", + "* installing *source* package ‘curl’ ...\n", + "** package ‘curl’ successfully unpacked and MD5 sums checked\n", + "** using staged installation\n", + "Found pkg-config cflags and libs!\n", + "Using PKG_CFLAGS=-I/usr/include/x86_64-linux-gnu\n", + "Using PKG_LIBS=-lcurl\n", + "** libs\n", + "rm -f curl.so callbacks.o curl.o download.o escape.o fetch.o form.o getdate.o handle.o ieproxy.o init.o interrupt.o multi.o nslookup.o reflist.o split.o ssl.o typechecking.o utils.o version.o winidn.o writer.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c callbacks.c -o callbacks.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c curl.c -o curl.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c download.c -o download.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c escape.c -o escape.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c fetch.c -o fetch.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c form.c -o form.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c getdate.c -o getdate.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c handle.c -o handle.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c ieproxy.c -o ieproxy.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c init.c -o init.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c interrupt.c -o interrupt.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c multi.c -o multi.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c nslookup.c -o nslookup.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c reflist.c -o reflist.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c split.c -o split.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c ssl.c -o ssl.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c typechecking.c -o typechecking.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c utils.c -o utils.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c version.c -o version.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c winidn.c -o winidn.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -I/usr/include/x86_64-linux-gnu -DSTRICT_R_HEADERS -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c writer.c -o writer.o\n", + "gcc -std=gnu99 -shared -L/usr/lib/R/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -o curl.so callbacks.o curl.o download.o escape.o fetch.o form.o getdate.o handle.o ieproxy.o init.o interrupt.o multi.o nslookup.o reflist.o split.o ssl.o typechecking.o utils.o version.o winidn.o writer.o -lcurl -L/usr/lib/R/lib -lR\n", + "installing to /home/webartifex/repos/urban-meal-delivery/.cache/r_libs/00LOCK-curl/00new/curl/libs\n", + "** R\n", + "** inst\n", + "** byte-compile and prepare package for lazy loading\n", + "** help\n", + "*** installing help indices\n", + "** building package indices\n", + "** installing vignettes\n", + "** testing if installed package can be loaded from temporary location\n", + "** checking absolute paths in shared objects and dynamic libraries\n", + "** testing if installed package can be loaded from final location\n", + "** testing if installed package keeps a record of temporary installation path\n", + "* DONE (curl)\n", + "* installing *source* package ‘digest’ ...\n", + "** package ‘digest’ successfully unpacked and MD5 sums checked\n", + "** using staged installation\n", + "** libs\n", + "g++ -std=gnu++11 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c SpookyV2.cpp -o SpookyV2.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c aes.c -o aes.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c blake3.c -o blake3.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c blake3_dispatch.c -o blake3_dispatch.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c blake3_portable.c -o blake3_portable.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c crc32.c -o crc32.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c digest.c -o digest.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c digest2int.c -o digest2int.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c init.c -o init.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c md5.c -o md5.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c pmurhash.c -o pmurhash.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c raes.c -o raes.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c sha1.c -o sha1.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c sha2.c -o sha2.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c sha256.c -o sha256.o\n", + "g++ -std=gnu++11 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c spooky_serialize.cpp -o spooky_serialize.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c xxhash.c -o xxhash.o\n", + "g++ -std=gnu++11 -shared -L/usr/lib/R/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -o digest.so SpookyV2.o aes.o blake3.o blake3_dispatch.o blake3_portable.o crc32.o digest.o digest2int.o init.o md5.o pmurhash.o raes.o sha1.o sha2.o sha256.o spooky_serialize.o xxhash.o -L/usr/lib/R/lib -lR\n", + "installing to /home/webartifex/repos/urban-meal-delivery/.cache/r_libs/00LOCK-digest/00new/digest/libs\n", + "** R\n", + "** demo\n", + "** inst\n", + "** byte-compile and prepare package for lazy loading\n", + "** help\n", + "*** installing help indices\n", + "** building package indices\n", + "** installing vignettes\n", + "** testing if installed package can be loaded from temporary location\n", + "** checking absolute paths in shared objects and dynamic libraries\n", + "** testing if installed package can be loaded from final location\n", + "** testing if installed package keeps a record of temporary installation path\n", + "* DONE (digest)\n", + "* installing *source* package ‘glue’ ...\n", + "** package ‘glue’ successfully unpacked and MD5 sums checked\n", + "** using staged installation\n", + "** libs\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c glue.c -o glue.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c init.c -o init.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c trim.c -o trim.o\n", + "gcc -std=gnu99 -shared -L/usr/lib/R/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -o glue.so glue.o init.o trim.o -L/usr/lib/R/lib -lR\n", + "installing to /home/webartifex/repos/urban-meal-delivery/.cache/r_libs/00LOCK-glue/00new/glue/libs\n", + "** R\n", + "** inst\n", + "** byte-compile and prepare package for lazy loading\n", + "** help\n", + "*** installing help indices\n", + "*** copying figures\n", + "** building package indices\n", + "** installing vignettes\n", + "** testing if installed package can be loaded from temporary location\n", + "** checking absolute paths in shared objects and dynamic libraries\n", + "** testing if installed package can be loaded from final location\n", + "** testing if installed package keeps a record of temporary installation path\n", + "* DONE (glue)\n", + "* installing *source* package ‘gtable’ ...\n", + "** package ‘gtable’ successfully unpacked and MD5 sums checked\n", + "** using staged installation\n", + "** R\n", + "** inst\n", + "** byte-compile and prepare package for lazy loading\n", + "** help\n", + "*** installing help indices\n", + "*** copying figures\n", + "** building package indices\n", + "** installing vignettes\n", + "** testing if installed package can be loaded from temporary location\n", + "** testing if installed package can be loaded from final location\n", + "** testing if installed package keeps a record of temporary installation path\n", + "* DONE (gtable)\n", + "* installing *source* package ‘rlang’ ...\n", + "** package ‘rlang’ successfully unpacked and MD5 sums checked\n", + "** using staged installation\n", + "** libs\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -I./lib/ -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c capture.c -o capture.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -I./lib/ -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c export.c -o export.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -I./lib/ -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c internal.c -o internal.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -I./lib/ -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c lib.c -o lib.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -I./lib/ -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c version.c -o version.o\n", + "gcc -std=gnu99 -shared -L/usr/lib/R/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -o rlang.so capture.o export.o internal.o lib.o version.o -L/usr/lib/R/lib -lR\n", + "installing to /home/webartifex/repos/urban-meal-delivery/.cache/r_libs/00LOCK-rlang/00new/rlang/libs\n", + "** R\n", + "** inst\n", + "** byte-compile and prepare package for lazy loading\n", + "** help\n", + "*** installing help indices\n", + "*** copying figures\n", + "** building package indices\n", + "** testing if installed package can be loaded from temporary location\n", + "** checking absolute paths in shared objects and dynamic libraries\n", + "** testing if installed package can be loaded from final location\n", + "** testing if installed package keeps a record of temporary installation path\n", + "* DONE (rlang)\n", + "* installing *source* package ‘withr’ ...\n", + "** package ‘withr’ successfully unpacked and MD5 sums checked\n", + "** using staged installation\n", + "** R\n", + "** inst\n", + "** byte-compile and prepare package for lazy loading\n", + "** help\n", + "*** installing help indices\n", + "*** copying figures\n", + "** building package indices\n", + "** installing vignettes\n", + "** testing if installed package can be loaded from temporary location\n", + "** testing if installed package can be loaded from final location\n", + "** testing if installed package keeps a record of temporary installation path\n", + "* DONE (withr)\n", + "* installing *source* package ‘quadprog’ ...\n", + "** package ‘quadprog’ successfully unpacked and MD5 sums checked\n", + "** using staged installation\n", + "** libs\n", + "gfortran -fno-optimize-sibling-calls -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -msse2 -mfpmath=sse -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -c aind.f -o aind.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c init.c -o init.o\n", + "gfortran -fno-optimize-sibling-calls -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -msse2 -mfpmath=sse -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -c solve.QP.compact.f -o solve.QP.compact.o\n", + "gfortran -fno-optimize-sibling-calls -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -msse2 -mfpmath=sse -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -c solve.QP.f -o solve.QP.o\n", + "gfortran -fno-optimize-sibling-calls -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -msse2 -mfpmath=sse -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -c util.f -o util.o\n", + "gcc -std=gnu99 -shared -L/usr/lib/R/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -o quadprog.so aind.o init.o solve.QP.compact.o solve.QP.o util.o -lblas -lgfortran -lm -lquadmath -lgfortran -lm -lquadmath -L/usr/lib/R/lib -lR\n", + "installing to /home/webartifex/repos/urban-meal-delivery/.cache/r_libs/00LOCK-quadprog/00new/quadprog/libs\n", + "** R\n", + "** byte-compile and prepare package for lazy loading\n", + "** help\n", + "*** installing help indices\n", + "** building package indices\n", + "** testing if installed package can be loaded from temporary location\n", + "** checking absolute paths in shared objects and dynamic libraries\n", + "** testing if installed package can be loaded from final location\n", + "** testing if installed package keeps a record of temporary installation path\n", + "* DONE (quadprog)\n", + "* installing *source* package ‘colorspace’ ...\n", + "** package ‘colorspace’ successfully unpacked and MD5 sums checked\n", + "** using staged installation\n", + "** libs\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c colorspace.c -o colorspace.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c init.c -o init.o\n", + "gcc -std=gnu99 -shared -L/usr/lib/R/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -o colorspace.so colorspace.o init.o -L/usr/lib/R/lib -lR\n", + "installing to /home/webartifex/repos/urban-meal-delivery/.cache/r_libs/00LOCK-colorspace/00new/colorspace/libs\n", + "** R\n", + "** data\n", + "*** moving datasets to lazyload DB\n", + "** demo\n", + "** inst\n", + "** byte-compile and prepare package for lazy loading\n", + "** help\n", + "*** installing help indices\n", + "** building package indices\n", + "** installing vignettes\n", + "** testing if installed package can be loaded from temporary location\n", + "** checking absolute paths in shared objects and dynamic libraries\n", + "** testing if installed package can be loaded from final location\n", + "** testing if installed package keeps a record of temporary installation path\n", + "* DONE (colorspace)\n", + "* installing *source* package ‘fracdiff’ ...\n", + "** package ‘fracdiff’ successfully unpacked and MD5 sums checked\n", + "** using staged installation\n", + "** libs\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c fdcore.c -o fdcore.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c fdgam.c -o fdgam.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c fdhess.c -o fdhess.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c fdmin.c -o fdmin.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c fdsim.c -o fdsim.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c init.c -o init.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c pmult.c -o pmult.o\n", + "gcc -std=gnu99 -shared -L/usr/lib/R/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -o fracdiff.so fdcore.o fdgam.o fdhess.o fdmin.o fdsim.o init.o pmult.o -lblas -lgfortran -lm -lquadmath -L/usr/lib/R/lib -lR\n", + "installing to /home/webartifex/repos/urban-meal-delivery/.cache/r_libs/00LOCK-fracdiff/00new/fracdiff/libs\n", + "** R\n", + "** byte-compile and prepare package for lazy loading\n", + "** help\n", + "*** installing help indices\n", + "** building package indices\n", + "** testing if installed package can be loaded from temporary location\n", + "** checking absolute paths in shared objects and dynamic libraries\n", + "** testing if installed package can be loaded from final location\n", + "** testing if installed package keeps a record of temporary installation path\n", + "* DONE (fracdiff)\n", + "* installing *source* package ‘magrittr’ ...\n", + "** package ‘magrittr’ successfully unpacked and MD5 sums checked\n", + "** using staged installation\n", + "** libs\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c pipe.c -o pipe.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c utils.c -o utils.o\n", + "gcc -std=gnu99 -shared -L/usr/lib/R/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -o magrittr.so pipe.o utils.o -L/usr/lib/R/lib -lR\n", + "installing to /home/webartifex/repos/urban-meal-delivery/.cache/r_libs/00LOCK-magrittr/00new/magrittr/libs\n", + "** R\n", + "** inst\n", + "** byte-compile and prepare package for lazy loading\n", + "** help\n", + "*** installing help indices\n", + "*** copying figures\n", + "** building package indices\n", + "** installing vignettes\n", + "** testing if installed package can be loaded from temporary location\n", + "** checking absolute paths in shared objects and dynamic libraries\n", + "** testing if installed package can be loaded from final location\n", + "** testing if installed package keeps a record of temporary installation path\n", + "* DONE (magrittr)\n", + "* installing *source* package ‘Rcpp’ ...\n", + "** package ‘Rcpp’ successfully unpacked and MD5 sums checked\n", + "** using staged installation\n", + "** libs\n", + "g++ -std=gnu++11 -I\"/usr/share/R/include\" -DNDEBUG -I../inst/include/ -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c api.cpp -o api.o\n", + "g++ -std=gnu++11 -I\"/usr/share/R/include\" -DNDEBUG -I../inst/include/ -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c attributes.cpp -o attributes.o\n", + "g++ -std=gnu++11 -I\"/usr/share/R/include\" -DNDEBUG -I../inst/include/ -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c barrier.cpp -o barrier.o\n", + "g++ -std=gnu++11 -I\"/usr/share/R/include\" -DNDEBUG -I../inst/include/ -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c date.cpp -o date.o\n", + "g++ -std=gnu++11 -I\"/usr/share/R/include\" -DNDEBUG -I../inst/include/ -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c module.cpp -o module.o\n", + "g++ -std=gnu++11 -I\"/usr/share/R/include\" -DNDEBUG -I../inst/include/ -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c rcpp_init.cpp -o rcpp_init.o\n", + "g++ -std=gnu++11 -shared -L/usr/lib/R/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -o Rcpp.so api.o attributes.o barrier.o date.o module.o rcpp_init.o -L/usr/lib/R/lib -lR\n", + "installing to /home/webartifex/repos/urban-meal-delivery/.cache/r_libs/00LOCK-Rcpp/00new/Rcpp/libs\n", + "** R\n", + "** inst\n", + "** byte-compile and prepare package for lazy loading\n", + "** help\n", + "*** installing help indices\n", + "** building package indices\n", + "** installing vignettes\n", + "** testing if installed package can be loaded from temporary location\n", + "** checking absolute paths in shared objects and dynamic libraries\n", + "** testing if installed package can be loaded from final location\n", + "** testing if installed package keeps a record of temporary installation path\n", + "* DONE (Rcpp)\n", + "* installing *source* package ‘timeDate’ ...\n", + "** package ‘timeDate’ successfully unpacked and MD5 sums checked\n", + "** using staged installation\n", + "** R\n", + "** inst\n", + "** byte-compile and prepare package for lazy loading\n", + "Creating a generic function for ‘sample’ from package ‘base’ in package ‘timeDate’\n", + "Creating a generic function for ‘getDataPart’ from package ‘methods’ in package ‘timeDate’\n", + "Creating a generic function for ‘abline’ from package ‘graphics’ in package ‘timeDate’\n", + "** help\n", + "*** installing help indices\n", + "** building package indices\n", + "** testing if installed package can be loaded from temporary location\n", + "** testing if installed package can be loaded from final location\n", + "** testing if installed package keeps a record of temporary installation path\n", + "* DONE (timeDate)\n", + "* installing *source* package ‘urca’ ...\n", + "** package ‘urca’ successfully unpacked and MD5 sums checked\n", + "** using staged installation\n", + "** libs\n", + "gfortran -fno-optimize-sibling-calls -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -c UnitRootMacKinnon.f -o UnitRootMacKinnon.o\n", + "\u001b[01m\u001b[KUnitRootMacKinnon.f:502:72:\u001b[m\u001b[K\n", + "\n", + " 502 | do 21 k=1,nobs\n", + " | \u001b[01;35m\u001b[K1\u001b[m\u001b[K\n", + "\u001b[01;35m\u001b[KWarning:\u001b[m\u001b[K Fortran 2018 deleted feature: Shared DO termination label 21 at \u001b[01;35m\u001b[K(1)\u001b[m\u001b[K\n", + "\u001b[01m\u001b[KUnitRootMacKinnon.f:505:72:\u001b[m\u001b[K\n", + "\n", + " 505 | do 24 l=j,nvar\n", + " | \u001b[01;35m\u001b[K1\u001b[m\u001b[K\n", + "\u001b[01;35m\u001b[KWarning:\u001b[m\u001b[K Fortran 2018 deleted feature: Shared DO termination label 24 at \u001b[01;35m\u001b[K(1)\u001b[m\u001b[K\n", + "\u001b[01m\u001b[KUnitRootMacKinnon.f:524:72:\u001b[m\u001b[K\n", + "\n", + " 524 | do 5 j=1,nvar\n", + " | \u001b[01;35m\u001b[K1\u001b[m\u001b[K\n", + "\u001b[01;35m\u001b[KWarning:\u001b[m\u001b[K Fortran 2018 deleted feature: Shared DO termination label 5 at \u001b[01;35m\u001b[K(1)\u001b[m\u001b[K\n", + "\u001b[01m\u001b[KUnitRootMacKinnon.f:570:72:\u001b[m\u001b[K\n", + "\n", + " 570 | 3 amat(i,j) = amat(i,j) - amat(k,i)*amat(k,j)\n", + " | \u001b[01;35m\u001b[K1\u001b[m\u001b[K\n", + "\u001b[01;35m\u001b[KWarning:\u001b[m\u001b[K Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 3 at \u001b[01;35m\u001b[K(1)\u001b[m\u001b[K\n", + "\u001b[01m\u001b[KUnitRootMacKinnon.f:595:72:\u001b[m\u001b[K\n", + "\n", + " 595 | 11 t = t - amat(i,k)*amat(k,j)\n", + " | \u001b[01;35m\u001b[K1\u001b[m\u001b[K\n", + "\u001b[01;35m\u001b[KWarning:\u001b[m\u001b[K Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 11 at \u001b[01;35m\u001b[K(1)\u001b[m\u001b[K\n", + "\u001b[01m\u001b[KUnitRootMacKinnon.f:596:72:\u001b[m\u001b[K\n", + "\n", + " 596 | 12 amat(i,j) = t*ooa\n", + " | \u001b[01;35m\u001b[K1\u001b[m\u001b[K\n", + "\u001b[01;35m\u001b[KWarning:\u001b[m\u001b[K Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 12 at \u001b[01;35m\u001b[K(1)\u001b[m\u001b[K\n", + "\u001b[01m\u001b[KUnitRootMacKinnon.f:602:72:\u001b[m\u001b[K\n", + "\n", + " 602 | 14 t = t + amat(i,k)*amat(j,k)\n", + " | \u001b[01;35m\u001b[K1\u001b[m\u001b[K\n", + "\u001b[01;35m\u001b[KWarning:\u001b[m\u001b[K Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 14 at \u001b[01;35m\u001b[K(1)\u001b[m\u001b[K\n", + "gcc -std=gnu99 -shared -L/usr/lib/R/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -o urca.so UnitRootMacKinnon.o -llapack -lblas -lgfortran -lm -lquadmath -lgfortran -lm -lquadmath -L/usr/lib/R/lib -lR\n", + "installing to /home/webartifex/repos/urban-meal-delivery/.cache/r_libs/00LOCK-urca/00new/urca/libs\n", + "** R\n", + "** data\n", + "** inst\n", + "** byte-compile and prepare package for lazy loading\n", + "** help\n", + "*** installing help indices\n", + "** building package indices\n", + "** testing if installed package can be loaded from temporary location\n", + "** checking absolute paths in shared objects and dynamic libraries\n", + "** testing if installed package can be loaded from final location\n", + "** testing if installed package keeps a record of temporary installation path\n", + "* DONE (urca)\n", + "* installing *source* package ‘zoo’ ...\n", + "** package ‘zoo’ successfully unpacked and MD5 sums checked\n", + "** using staged installation\n", + "** libs\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -I../inst/include -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c coredata.c -o coredata.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -I../inst/include -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c init.c -o init.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -I../inst/include -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c lag.c -o lag.o\n", + "gcc -std=gnu99 -shared -L/usr/lib/R/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -o zoo.so coredata.o init.o lag.o -L/usr/lib/R/lib -lR\n", + "installing to /home/webartifex/repos/urban-meal-delivery/.cache/r_libs/00LOCK-zoo/00new/zoo/libs\n", + "** R\n", + "** demo\n", + "** inst\n", + "** byte-compile and prepare package for lazy loading\n", + "** help\n", + "*** installing help indices\n", + "** building package indices\n", + "** installing vignettes\n", + "** testing if installed package can be loaded from temporary location\n", + "** checking absolute paths in shared objects and dynamic libraries\n", + "** testing if installed package can be loaded from final location\n", + "** testing if installed package keeps a record of temporary installation path\n", + "* DONE (zoo)\n", + "* installing *source* package ‘diffobj’ ...\n", + "** package ‘diffobj’ successfully unpacked and MD5 sums checked\n", + "** using staged installation\n", + "** libs\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c diff.c -o diff.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c diffobj.c -o diffobj.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c init.c -o init.o\n", + "gcc -std=gnu99 -shared -L/usr/lib/R/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -o diffobj.so diff.o diffobj.o init.o -L/usr/lib/R/lib -lR\n", + "installing to /home/webartifex/repos/urban-meal-delivery/.cache/r_libs/00LOCK-diffobj/00new/diffobj/libs\n", + "** R\n", + "** inst\n", + "** byte-compile and prepare package for lazy loading\n", + "** help\n", + "*** installing help indices\n", + "** building package indices\n", + "** installing vignettes\n", + "** testing if installed package can be loaded from temporary location\n", + "** checking absolute paths in shared objects and dynamic libraries\n", + "** testing if installed package can be loaded from final location\n", + "** testing if installed package keeps a record of temporary installation path\n", + "* DONE (diffobj)\n", + "* installing *source* package ‘desc’ ...\n", + "** package ‘desc’ successfully unpacked and MD5 sums checked\n", + "** using staged installation\n", + "** R\n", + "** inst\n", + "** byte-compile and prepare package for lazy loading\n", + "** help\n", + "*** installing help indices\n", + "** building package indices\n", + "** testing if installed package can be loaded from temporary location\n", + "** testing if installed package can be loaded from final location\n", + "** testing if installed package keeps a record of temporary installation path\n", + "* DONE (desc)\n", + "* installing *source* package ‘processx’ ...\n", + "** package ‘processx’ successfully unpacked and MD5 sums checked\n", + "** using staged installation\n", + "** libs\n", + "gcc -std=gnu99 -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -Wall tools/px.c -o tools/px\n", + "gcc -std=gnu99 -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g supervisor/supervisor.c supervisor/utils.c \\\n", + " -o supervisor/supervisor\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c base64.c -o base64.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c client.c -o client.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c errors.c -o errors.o\n", + "gcc -std=gnu99 -shared -L\"/usr/lib/R/lib\" -Wl,-Bsymbolic-functions -Wl,-z,relro -o client.so base64.o client.o errors.o -L\"/usr/lib/R/lib\" -lR\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c init.c -o init.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c poll.c -o poll.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c processx-connection.c -o processx-connection.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c processx-vector.c -o processx-vector.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c create-time.c -o create-time.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c unix/childlist.c -o unix/childlist.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c unix/connection.c -o unix/connection.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c unix/processx.c -o unix/processx.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c unix/sigchld.c -o unix/sigchld.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c unix/utils.c -o unix/utils.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c unix/named_pipe.c -o unix/named_pipe.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c cleancall.c -o cleancall.o\n", + "gcc -std=gnu99 -shared -L/usr/lib/R/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -o processx.so init.o poll.o errors.o processx-connection.o processx-vector.o create-time.o base64.o unix/childlist.o unix/connection.o unix/processx.o unix/sigchld.o unix/utils.o unix/named_pipe.o cleancall.o -L/usr/lib/R/lib -lR\n", + "installing via 'install.libs.R' to /home/webartifex/repos/urban-meal-delivery/.cache/r_libs/00LOCK-processx/00new/processx\n", + "** R\n", + "** inst\n", + "** byte-compile and prepare package for lazy loading\n", + "** help\n", + "*** installing help indices\n", + "** building package indices\n", + "** testing if installed package can be loaded from temporary location\n", + "** checking absolute paths in shared objects and dynamic libraries\n", + "** testing if installed package can be loaded from final location\n", + "** testing if installed package keeps a record of temporary installation path\n", + "* DONE (processx)\n", + "* installing *source* package ‘lifecycle’ ...\n", + "** package ‘lifecycle’ successfully unpacked and MD5 sums checked\n", + "** using staged installation\n", + "** R\n", + "** inst\n", + "** byte-compile and prepare package for lazy loading\n", + "** help\n", + "*** installing help indices\n", + "*** copying figures\n", + "** building package indices\n", + "** installing vignettes\n", + "** testing if installed package can be loaded from temporary location\n", + "** testing if installed package can be loaded from final location\n", + "** testing if installed package keeps a record of temporary installation path\n", + "* DONE (lifecycle)\n", + "* installing *source* package ‘munsell’ ...\n", + "** package ‘munsell’ successfully unpacked and MD5 sums checked\n", + "** using staged installation\n", + "** R\n", + "** inst\n", + "** byte-compile and prepare package for lazy loading\n", + "** help\n", + "*** installing help indices\n", + "*** copying figures\n", + "** building package indices\n", + "** testing if installed package can be loaded from temporary location\n", + "** testing if installed package can be loaded from final location\n", + "** testing if installed package keeps a record of temporary installation path\n", + "* DONE (munsell)\n", + "* installing *source* package ‘cli’ ...\n", + "** package ‘cli’ successfully unpacked and MD5 sums checked\n", + "** using staged installation\n", + "** R\n", + "** inst\n", + "** byte-compile and prepare package for lazy loading\n", + "** help\n", + "*** installing help indices\n", + "*** copying figures\n", + "** building package indices\n", + "** testing if installed package can be loaded from temporary location\n", + "** testing if installed package can be loaded from final location\n", + "** testing if installed package keeps a record of temporary installation path\n", + "* DONE (cli)\n", + "* installing *source* package ‘ellipsis’ ...\n", + "** package ‘ellipsis’ successfully unpacked and MD5 sums checked\n", + "** using staged installation\n", + "** libs\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c dots.c -o dots.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c init.c -o init.o\n", + "gcc -std=gnu99 -shared -L/usr/lib/R/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -o ellipsis.so dots.o init.o -L/usr/lib/R/lib -lR\n", + "installing to /home/webartifex/repos/urban-meal-delivery/.cache/r_libs/00LOCK-ellipsis/00new/ellipsis/libs\n", + "** R\n", + "** byte-compile and prepare package for lazy loading\n", + "** help\n", + "*** installing help indices\n", + "** building package indices\n", + "** testing if installed package can be loaded from temporary location\n", + "** checking absolute paths in shared objects and dynamic libraries\n", + "** testing if installed package can be loaded from final location\n", + "** testing if installed package keeps a record of temporary installation path\n", + "* DONE (ellipsis)\n", + "* installing *source* package ‘xts’ ...\n", + "** package ‘xts’ successfully unpacked and MD5 sums checked\n", + "** using staged installation\n", + "** libs\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -I../inst/include -I'/home/webartifex/repos/urban-meal-delivery/.cache/r_libs/zoo/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c add_class.c -o add_class.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -I../inst/include -I'/home/webartifex/repos/urban-meal-delivery/.cache/r_libs/zoo/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c any.c -o any.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -I../inst/include -I'/home/webartifex/repos/urban-meal-delivery/.cache/r_libs/zoo/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c attr.c -o attr.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -I../inst/include -I'/home/webartifex/repos/urban-meal-delivery/.cache/r_libs/zoo/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c binsearch.c -o binsearch.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -I../inst/include -I'/home/webartifex/repos/urban-meal-delivery/.cache/r_libs/zoo/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c coredata.c -o coredata.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -I../inst/include -I'/home/webartifex/repos/urban-meal-delivery/.cache/r_libs/zoo/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c diff.c -o diff.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -I../inst/include -I'/home/webartifex/repos/urban-meal-delivery/.cache/r_libs/zoo/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c dimnames.c -o dimnames.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -I../inst/include -I'/home/webartifex/repos/urban-meal-delivery/.cache/r_libs/zoo/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c endpoints.c -o endpoints.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -I../inst/include -I'/home/webartifex/repos/urban-meal-delivery/.cache/r_libs/zoo/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c extract_col.c -o extract_col.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -I../inst/include -I'/home/webartifex/repos/urban-meal-delivery/.cache/r_libs/zoo/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c init.c -o init.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -I../inst/include -I'/home/webartifex/repos/urban-meal-delivery/.cache/r_libs/zoo/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c isOrdered.c -o isOrdered.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -I../inst/include -I'/home/webartifex/repos/urban-meal-delivery/.cache/r_libs/zoo/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c isXts.c -o isXts.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -I../inst/include -I'/home/webartifex/repos/urban-meal-delivery/.cache/r_libs/zoo/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c merge.c -o merge.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -I../inst/include -I'/home/webartifex/repos/urban-meal-delivery/.cache/r_libs/zoo/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c na.c -o na.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -I../inst/include -I'/home/webartifex/repos/urban-meal-delivery/.cache/r_libs/zoo/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c period_apply.c -o period_apply.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -I../inst/include -I'/home/webartifex/repos/urban-meal-delivery/.cache/r_libs/zoo/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c period_arithmetic.c -o period_arithmetic.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -I../inst/include -I'/home/webartifex/repos/urban-meal-delivery/.cache/r_libs/zoo/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c period_quantile.c -o period_quantile.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -I../inst/include -I'/home/webartifex/repos/urban-meal-delivery/.cache/r_libs/zoo/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c rbind.c -o rbind.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -I../inst/include -I'/home/webartifex/repos/urban-meal-delivery/.cache/r_libs/zoo/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c rollfun.c -o rollfun.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -I../inst/include -I'/home/webartifex/repos/urban-meal-delivery/.cache/r_libs/zoo/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c runSum.c -o runSum.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -I../inst/include -I'/home/webartifex/repos/urban-meal-delivery/.cache/r_libs/zoo/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c startofyear.c -o startofyear.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -I../inst/include -I'/home/webartifex/repos/urban-meal-delivery/.cache/r_libs/zoo/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c subset.c -o subset.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -I../inst/include -I'/home/webartifex/repos/urban-meal-delivery/.cache/r_libs/zoo/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c subset.old.c -o subset.old.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -I../inst/include -I'/home/webartifex/repos/urban-meal-delivery/.cache/r_libs/zoo/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c toperiod.c -o toperiod.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -I../inst/include -I'/home/webartifex/repos/urban-meal-delivery/.cache/r_libs/zoo/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c totalcols.c -o totalcols.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -I../inst/include -I'/home/webartifex/repos/urban-meal-delivery/.cache/r_libs/zoo/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c tryXts.c -o tryXts.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -I../inst/include -I'/home/webartifex/repos/urban-meal-delivery/.cache/r_libs/zoo/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c unique.time.c -o unique.time.o\n", + "gcc -std=gnu99 -shared -L/usr/lib/R/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -o xts.so add_class.o any.o attr.o binsearch.o coredata.o diff.o dimnames.o endpoints.o extract_col.o init.o isOrdered.o isXts.o merge.o na.o period_apply.o period_arithmetic.o period_quantile.o rbind.o rollfun.o runSum.o startofyear.o subset.o subset.old.o toperiod.o totalcols.o tryXts.o unique.time.o -L/usr/lib/R/lib -lR\n", + "installing to /home/webartifex/repos/urban-meal-delivery/.cache/r_libs/00LOCK-xts/00new/xts/libs\n", + "** R\n", + "** data\n", + "** inst\n", + "** byte-compile and prepare package for lazy loading\n", + "** help\n", + "*** installing help indices\n", + "** building package indices\n", + "** installing vignettes\n", + "** testing if installed package can be loaded from temporary location\n", + "** checking absolute paths in shared objects and dynamic libraries\n", + "** testing if installed package can be loaded from final location\n", + "** testing if installed package keeps a record of temporary installation path\n", + "* DONE (xts)\n", + "* installing *source* package ‘lmtest’ ...\n", + "** package ‘lmtest’ successfully unpacked and MD5 sums checked\n", + "** using staged installation\n", + "** libs\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c init.c -o init.o\n", + "gfortran -fno-optimize-sibling-calls -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -c pan.f -o pan.o\n", + "gcc -std=gnu99 -shared -L/usr/lib/R/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -o lmtest.so init.o pan.o -lgfortran -lm -lquadmath -L/usr/lib/R/lib -lR\n", + "installing to /home/webartifex/repos/urban-meal-delivery/.cache/r_libs/00LOCK-lmtest/00new/lmtest/libs\n", + "** R\n", + "** data\n", + "*** moving datasets to lazyload DB\n", + "** inst\n", + "** byte-compile and prepare package for lazy loading\n", + "** help\n", + "*** installing help indices\n", + "** building package indices\n", + "** installing vignettes\n", + "** testing if installed package can be loaded from temporary location\n", + "** checking absolute paths in shared objects and dynamic libraries\n", + "** testing if installed package can be loaded from final location\n", + "** testing if installed package keeps a record of temporary installation path\n", + "* DONE (lmtest)\n", + "* installing *source* package ‘RcppArmadillo’ ...\n", + "** package ‘RcppArmadillo’ successfully unpacked and MD5 sums checked\n", + "** using staged installation\n", + "checking whether the C++ compiler works... yes\n", + "checking for C++ compiler default output file name... a.out\n", + "checking for suffix of executables... \n", + "checking whether we are cross compiling... no\n", + "checking for suffix of object files... o\n", + "checking whether we are using the GNU C++ compiler... yes\n", + "checking whether g++ -std=gnu++11 accepts -g... yes\n", + "checking how to run the C++ preprocessor... g++ -std=gnu++11 -E\n", + "checking whether we are using the GNU C++ compiler... (cached) yes\n", + "checking whether g++ -std=gnu++11 accepts -g... (cached) yes\n", + "checking whether we have a suitable tempdir... /tmp/user/1000\n", + "checking whether R CMD SHLIB can already compile programs using OpenMP... yes\n", + "checking LAPACK_LIBS... system LAPACK found\n", + "configure: creating ./config.status\n", + "config.status: creating inst/include/RcppArmadilloConfigGenerated.h\n", + "config.status: creating src/Makevars\n", + "** libs\n", + "g++ -std=gnu++11 -I\"/usr/share/R/include\" -DNDEBUG -I'/home/webartifex/repos/urban-meal-delivery/.cache/r_libs/Rcpp/include' -I../inst/include -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c RcppArmadillo.cpp -o RcppArmadillo.o\n", + "g++ -std=gnu++11 -I\"/usr/share/R/include\" -DNDEBUG -I'/home/webartifex/repos/urban-meal-delivery/.cache/r_libs/Rcpp/include' -I../inst/include -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c RcppExports.cpp -o RcppExports.o\n", + "g++ -std=gnu++11 -I\"/usr/share/R/include\" -DNDEBUG -I'/home/webartifex/repos/urban-meal-delivery/.cache/r_libs/Rcpp/include' -I../inst/include -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c fastLm.cpp -o fastLm.o\n", + "g++ -std=gnu++11 -shared -L/usr/lib/R/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -o RcppArmadillo.so RcppArmadillo.o RcppExports.o fastLm.o -llapack -lblas -lgfortran -lm -lquadmath -L/usr/lib/R/lib -lR\n", + "installing to /home/webartifex/repos/urban-meal-delivery/.cache/r_libs/00LOCK-RcppArmadillo/00new/RcppArmadillo/libs\n", + "** R\n", + "** inst\n", + "** byte-compile and prepare package for lazy loading\n", + "** help\n", + "*** installing help indices\n", + "** building package indices\n", + "** installing vignettes\n", + "** testing if installed package can be loaded from temporary location\n", + "** checking absolute paths in shared objects and dynamic libraries\n", + "** testing if installed package can be loaded from final location\n", + "** testing if installed package keeps a record of temporary installation path\n", + "* DONE (RcppArmadillo)\n", + "* installing *source* package ‘callr’ ...\n", + "** package ‘callr’ successfully unpacked and MD5 sums checked\n", + "** using staged installation\n", + "** R\n", + "** inst\n", + "** byte-compile and prepare package for lazy loading\n", + "** help\n", + "*** installing help indices\n", + "** building package indices\n", + "** testing if installed package can be loaded from temporary location\n", + "** testing if installed package can be loaded from final location\n", + "** testing if installed package keeps a record of temporary installation path\n", + "* DONE (callr)\n", + "* installing *source* package ‘vctrs’ ...\n", + "** package ‘vctrs’ successfully unpacked and MD5 sums checked\n", + "** using staged installation\n", + "** libs\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c altrep-rle.c -o altrep-rle.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c arg-counter.c -o arg-counter.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c arg.c -o arg.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fvisibility=hidden -fpic -g -O2 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-I\"/usr/share/R/include\" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c cast-bare.c -o cast-bare.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c cast-dispatch.c -o cast-dispatch.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c cast.c -o cast.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c compare.c -o compare.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c complete.c -o complete.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c conditions.c -o conditions.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c dictionary.c -o dictionary.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fvisibility=hidden -fpic -g -O2 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-DNDEBUG -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c group.c -o group.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c growable.c -o growable.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c hash.c -o hash.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c init.c -o init.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c names.c -o names.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c order-groups.c -o order-groups.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c order-radix.c -o order-radix.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c order-sortedness.c -o order-sortedness.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c order-truelength.c -o order-truelength.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c poly-op.c -o poly-op.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c proxy-restore.c -o proxy-restore.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c proxy.c -o proxy.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c ptype2-dispatch.c -o ptype2-dispatch.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c rep.c -o rep.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c runs.c -o runs.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c shape.c -o shape.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c size-common.c -o size-common.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c size.c -o size.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c slice-array.c -o slice-array.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c slice-assign-array.c -o slice-assign-array.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c slice-assign.c -o slice-assign.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c slice-chop.c -o slice-chop.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c slice.c -o slice.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c split.c -o split.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c subscript-loc.c -o subscript-loc.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c subscript.c -o subscript.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c translate.c -o translate.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c type-data-frame.c -o type-data-frame.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c type-date-time.c -o type-date-time.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c type-factor.c -o type-factor.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c type-info.c -o type-info.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c type-tibble.c -o type-tibble.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c type.c -o type.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c type2.c -o type2.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c typeof2-s3.c -o typeof2-s3.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c typeof2.c -o typeof2.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c unspecified.c -o unspecified.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c utils-dispatch.c -o utils-dispatch.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c utils-rlang.c -o utils-rlang.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c utils.c -o utils.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fvisibility=hidden -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c version.c -o version.o\n", + "gcc -std=gnu99 -shared -L/usr/lib/R/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -o vctrs.so altrep-rle.o arg-counter.o arg.o bind.o c-unchop.o c.o callables.o cast-bare.o cast-dispatch.o cast.o compare.o complete.o conditions.o dictionary.o dim.o equal.o fields.o fill.o group.o growable.o hash.o init.o names.o order-groups.o order-radix.o order-sortedness.o order-truelength.o poly-op.o proxy-restore.o proxy.o ptype2-dispatch.o rep.o runs.o shape.o size-common.o size.o slice-array.o slice-assign-array.o slice-assign.o slice-chop.o slice.o split.o subscript-loc.o subscript.o translate.o type-data-frame.o type-date-time.o type-factor.o type-info.o type-tibble.o type.o type2.o typeof2-s3.o typeof2.o unspecified.o utils-dispatch.o utils-rlang.o utils.o version.o -L/usr/lib/R/lib -lR\n", + "installing to /home/webartifex/repos/urban-meal-delivery/.cache/r_libs/00LOCK-vctrs/00new/vctrs/libs\n", + "** R\n", + "** inst\n", + "** byte-compile and prepare package for lazy loading\n", + "** help\n", + "*** installing help indices\n", + "*** copying figures\n", + "** building package indices\n", + "** installing vignettes\n", + "** testing if installed package can be loaded from temporary location\n", + "** checking absolute paths in shared objects and dynamic libraries\n", + "** testing if installed package can be loaded from final location\n", + "** testing if installed package keeps a record of temporary installation path\n", + "* DONE (vctrs)\n", + "* installing *source* package ‘TTR’ ...\n", + "** package ‘TTR’ successfully unpacked and MD5 sums checked\n", + "** using staged installation\n", + "** libs\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -I'/home/webartifex/repos/urban-meal-delivery/.cache/r_libs/xts/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c adjRatios.c -o adjRatios.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -I'/home/webartifex/repos/urban-meal-delivery/.cache/r_libs/xts/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c aroon.c -o aroon.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -I'/home/webartifex/repos/urban-meal-delivery/.cache/r_libs/xts/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c init.c -o init.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -I'/home/webartifex/repos/urban-meal-delivery/.cache/r_libs/xts/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c moving_averages.c -o moving_averages.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -I'/home/webartifex/repos/urban-meal-delivery/.cache/r_libs/xts/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c percent_rank.c -o percent_rank.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -I'/home/webartifex/repos/urban-meal-delivery/.cache/r_libs/xts/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c runfun.c -o runfun.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -I'/home/webartifex/repos/urban-meal-delivery/.cache/r_libs/xts/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c sar.c -o sar.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -I'/home/webartifex/repos/urban-meal-delivery/.cache/r_libs/xts/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c wilderSum.c -o wilderSum.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -I'/home/webartifex/repos/urban-meal-delivery/.cache/r_libs/xts/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c zigzag.c -o zigzag.o\n", + "gcc -std=gnu99 -shared -L/usr/lib/R/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -o TTR.so adjRatios.o aroon.o init.o moving_averages.o percent_rank.o runfun.o sar.o wilderSum.o zigzag.o -L/usr/lib/R/lib -lR\n", + "installing to /home/webartifex/repos/urban-meal-delivery/.cache/r_libs/00LOCK-TTR/00new/TTR/libs\n", + "** R\n", + "** data\n", + "** inst\n", + "** byte-compile and prepare package for lazy loading\n", + "** help\n", + "*** installing help indices\n", + "** building package indices\n", + "** testing if installed package can be loaded from temporary location\n", + "** checking absolute paths in shared objects and dynamic libraries\n", + "** testing if installed package can be loaded from final location\n", + "** testing if installed package keeps a record of temporary installation path\n", + "* DONE (TTR)\n", + "* installing *source* package ‘scales’ ...\n", + "** package ‘scales’ successfully unpacked and MD5 sums checked\n", + "** using staged installation\n", + "** R\n", + "** byte-compile and prepare package for lazy loading\n", + "** help\n", + "*** installing help indices\n", + "*** copying figures\n", + "** building package indices\n", + "** testing if installed package can be loaded from temporary location\n", + "** testing if installed package can be loaded from final location\n", + "** testing if installed package keeps a record of temporary installation path\n", + "* DONE (scales)\n", + "* installing *source* package ‘pkgbuild’ ...\n", + "** package ‘pkgbuild’ successfully unpacked and MD5 sums checked\n", + "** using staged installation\n", + "** R\n", + "** byte-compile and prepare package for lazy loading\n", + "** help\n", + "*** installing help indices\n", + "** building package indices\n", + "** testing if installed package can be loaded from temporary location\n", + "** testing if installed package can be loaded from final location\n", + "** testing if installed package keeps a record of temporary installation path\n", + "* DONE (pkgbuild)\n", + "* installing *source* package ‘pillar’ ...\n", + "** package ‘pillar’ successfully unpacked and MD5 sums checked\n", + "** using staged installation\n", + "** R\n", + "** byte-compile and prepare package for lazy loading\n", + "** help\n", + "*** installing help indices\n", + "*** copying figures\n", + "** building package indices\n", + "** testing if installed package can be loaded from temporary location\n", + "** testing if installed package can be loaded from final location\n", + "** testing if installed package keeps a record of temporary installation path\n", + "* DONE (pillar)\n", + "* installing *source* package ‘quantmod’ ...\n", + "** package ‘quantmod’ successfully unpacked and MD5 sums checked\n", + "** using staged installation\n", + "** R\n", + "** demo\n", + "** byte-compile and prepare package for lazy loading\n", + "** help\n", + "*** installing help indices\n", + "** building package indices\n", + "** testing if installed package can be loaded from temporary location\n", + "** testing if installed package can be loaded from final location\n", + "** testing if installed package keeps a record of temporary installation path\n", + "* DONE (quantmod)\n", + "* installing *source* package ‘pkgload’ ...\n", + "** package ‘pkgload’ successfully unpacked and MD5 sums checked\n", + "** using staged installation\n", + "** libs\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c unlock.c -o unlock.o\n", + "gcc -std=gnu99 -shared -L/usr/lib/R/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -o pkgload.so unlock.o -L/usr/lib/R/lib -lR\n", + "installing to /home/webartifex/repos/urban-meal-delivery/.cache/r_libs/00LOCK-pkgload/00new/pkgload/libs\n", + "** R\n", + "** inst\n", + "** byte-compile and prepare package for lazy loading\n", + "** help\n", + "*** installing help indices\n", + "** building package indices\n", + "** testing if installed package can be loaded from temporary location\n", + "** checking absolute paths in shared objects and dynamic libraries\n", + "** testing if installed package can be loaded from final location\n", + "** testing if installed package keeps a record of temporary installation path\n", + "* DONE (pkgload)\n", + "* installing *source* package ‘tibble’ ...\n", + "** package ‘tibble’ successfully unpacked and MD5 sums checked\n", + "** using staged installation\n", + "** libs\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c attributes.c -o attributes.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c coerce.c -o coerce.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c init.c -o init.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c matrixToDataFrame.c -o matrixToDataFrame.o\n", + "gcc -std=gnu99 -shared -L/usr/lib/R/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -o tibble.so attributes.o coerce.o init.o matrixToDataFrame.o -L/usr/lib/R/lib -lR\n", + "installing to /home/webartifex/repos/urban-meal-delivery/.cache/r_libs/00LOCK-tibble/00new/tibble/libs\n", + "** R\n", + "** inst\n", + "** byte-compile and prepare package for lazy loading\n", + "** help\n", + "*** installing help indices\n", + "*** copying figures\n", + "** building package indices\n", + "** installing vignettes\n", + "** testing if installed package can be loaded from temporary location\n", + "** checking absolute paths in shared objects and dynamic libraries\n", + "** testing if installed package can be loaded from final location\n", + "** testing if installed package keeps a record of temporary installation path\n", + "* DONE (tibble)\n", + "* installing *source* package ‘tseries’ ...\n", + "** package ‘tseries’ successfully unpacked and MD5 sums checked\n", + "** using staged installation\n", + "** libs\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c arma.c -o arma.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c bdstest.c -o bdstest.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c boot.c -o boot.o\n", + "gfortran -fno-optimize-sibling-calls -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -c cfuncs.f90 -o cfuncs.o\n", + "gfortran -fno-optimize-sibling-calls -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -c dsumsl.f -o dsumsl.o\n", + "\u001b[01m\u001b[Kdsumsl.f:1004:72:\u001b[m\u001b[K\n", + "\n", + " 1004 | 10 W(I) = A*X(I) + Y(I)\n", + " | \u001b[01;35m\u001b[K1\u001b[m\u001b[K\n", + "\u001b[01;35m\u001b[KWarning:\u001b[m\u001b[K Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at \u001b[01;35m\u001b[K(1)\u001b[m\u001b[K\n", + "\u001b[01m\u001b[Kdsumsl.f:1123:72:\u001b[m\u001b[K\n", + "\n", + " 1123 | 10 Y(I) = S\n", + " | \u001b[01;35m\u001b[K1\u001b[m\u001b[K\n", + "\u001b[01;35m\u001b[KWarning:\u001b[m\u001b[K Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at \u001b[01;35m\u001b[K(1)\u001b[m\u001b[K\n", + "\u001b[01m\u001b[Kdsumsl.f:1137:72:\u001b[m\u001b[K\n", + "\n", + " 1137 | 10 X(I) = Y(I) / Z(I)\n", + " | \u001b[01;35m\u001b[K1\u001b[m\u001b[K\n", + "\u001b[01;35m\u001b[KWarning:\u001b[m\u001b[K Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at \u001b[01;35m\u001b[K(1)\u001b[m\u001b[K\n", + "\u001b[01m\u001b[Kdsumsl.f:1141:72:\u001b[m\u001b[K\n", + "\n", + " 1141 | 30 X(I) = Y(I) * Z(I)\n", + " | \u001b[01;35m\u001b[K1\u001b[m\u001b[K\n", + "\u001b[01;35m\u001b[KWarning:\u001b[m\u001b[K Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 30 at \u001b[01;35m\u001b[K(1)\u001b[m\u001b[K\n", + "\u001b[01m\u001b[Kdsumsl.f:1224:72:\u001b[m\u001b[K\n", + "\n", + " 1224 | 30 Z(I) = CY * Z(I) - CS * W(I)\n", + " | \u001b[01;35m\u001b[K1\u001b[m\u001b[K\n", + "\u001b[01;35m\u001b[KWarning:\u001b[m\u001b[K Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 30 at \u001b[01;35m\u001b[K(1)\u001b[m\u001b[K\n", + "\u001b[01m\u001b[Kdsumsl.f:1908:72:\u001b[m\u001b[K\n", + "\n", + " 1908 | 10 STEP(I) = G(I) / GNORM\n", + " | \u001b[01;35m\u001b[K1\u001b[m\u001b[K\n", + "\u001b[01;35m\u001b[KWarning:\u001b[m\u001b[K Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at \u001b[01;35m\u001b[K(1)\u001b[m\u001b[K\n", + "\u001b[01m\u001b[Kdsumsl.f:1923:72:\u001b[m\u001b[K\n", + "\n", + " 1923 | 20 STEP(I) = -NWTSTP(I)\n", + " | \u001b[01;35m\u001b[K1\u001b[m\u001b[K\n", + "\u001b[01;35m\u001b[KWarning:\u001b[m\u001b[K Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 20 at \u001b[01;35m\u001b[K(1)\u001b[m\u001b[K\n", + "\u001b[01m\u001b[Kdsumsl.f:1941:72:\u001b[m\u001b[K\n", + "\n", + " 1941 | 40 STEP(I) = T * NWTSTP(I)\n", + " | \u001b[01;35m\u001b[K1\u001b[m\u001b[K\n", + "\u001b[01;35m\u001b[KWarning:\u001b[m\u001b[K Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 40 at \u001b[01;35m\u001b[K(1)\u001b[m\u001b[K\n", + "\u001b[01m\u001b[Kdsumsl.f:1955:72:\u001b[m\u001b[K\n", + "\n", + " 1955 | 60 STEP(I) = T * DIG(I)\n", + " | \u001b[01;35m\u001b[K1\u001b[m\u001b[K\n", + "\u001b[01;35m\u001b[KWarning:\u001b[m\u001b[K Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 60 at \u001b[01;35m\u001b[K(1)\u001b[m\u001b[K\n", + "\u001b[01m\u001b[Kdsumsl.f:1982:72:\u001b[m\u001b[K\n", + "\n", + " 1982 | 80 STEP(I) = T1*DIG(I) + T2*NWTSTP(I)\n", + " | \u001b[01;35m\u001b[K1\u001b[m\u001b[K\n", + "\u001b[01;35m\u001b[KWarning:\u001b[m\u001b[K Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 80 at \u001b[01;35m\u001b[K(1)\u001b[m\u001b[K\n", + "\u001b[01m\u001b[Kdsumsl.f:2226:72:\u001b[m\u001b[K\n", + "\n", + " 2226 | 10 X(I) = Y(I)\n", + " | \u001b[01;35m\u001b[K1\u001b[m\u001b[K\n", + "\u001b[01;35m\u001b[KWarning:\u001b[m\u001b[K Fortran 2018 deleted feature: DO termination statement which is not END DO or CONTINUE with label 10 at \u001b[01;35m\u001b[K(1)\u001b[m\u001b[K\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c formats.c -o formats.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c garch.c -o garch.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c init.c -o init.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c ppsum.c -o ppsum.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c tsutils.c -o tsutils.o\n", + "gcc -std=gnu99 -shared -L/usr/lib/R/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -o tseries.so arma.o bdstest.o boot.o cfuncs.o dsumsl.o formats.o garch.o init.o ppsum.o tsutils.o -lblas -lgfortran -lm -lquadmath -lgfortran -lm -lquadmath -L/usr/lib/R/lib -lR\n", + "installing to /home/webartifex/repos/urban-meal-delivery/.cache/r_libs/00LOCK-tseries/00new/tseries/libs\n", + "** R\n", + "** data\n", + "** inst\n", + "** byte-compile and prepare package for lazy loading\n", + "** help\n", + "*** installing help indices\n", + "** building package indices\n", + "** testing if installed package can be loaded from temporary location\n", + "** checking absolute paths in shared objects and dynamic libraries\n", + "** testing if installed package can be loaded from final location\n", + "** testing if installed package keeps a record of temporary installation path\n", + "* DONE (tseries)\n", + "* installing *source* package ‘rematch2’ ...\n", + "** package ‘rematch2’ successfully unpacked and MD5 sums checked\n", + "** using staged installation\n", + "** R\n", + "** byte-compile and prepare package for lazy loading\n", + "** help\n", + "*** installing help indices\n", + "** building package indices\n", + "** testing if installed package can be loaded from temporary location\n", + "** testing if installed package can be loaded from final location\n", + "** testing if installed package keeps a record of temporary installation path\n", + "* DONE (rematch2)\n", + "* installing *source* package ‘waldo’ ...\n", + "** package ‘waldo’ successfully unpacked and MD5 sums checked\n", + "** using staged installation\n", + "** R\n", + "** byte-compile and prepare package for lazy loading\n", + "** help\n", + "*** installing help indices\n", + "*** copying figures\n", + "** building package indices\n", + "** testing if installed package can be loaded from temporary location\n", + "** testing if installed package can be loaded from final location\n", + "** testing if installed package keeps a record of temporary installation path\n", + "* DONE (waldo)\n", + "* installing *source* package ‘testthat’ ...\n", + "** package ‘testthat’ successfully unpacked and MD5 sums checked\n", + "** using staged installation\n", + "** libs\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c init.c -o init.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c reassign.c -o reassign.o\n", + "g++ -std=gnu++11 -I\"/usr/share/R/include\" -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c test-catch.cpp -o test-catch.o\n", + "g++ -std=gnu++11 -I\"/usr/share/R/include\" -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c test-example.cpp -o test-example.o\n", + "g++ -std=gnu++11 -I\"/usr/share/R/include\" -DNDEBUG -I../inst/include -DCOMPILING_TESTTHAT -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c test-runner.cpp -o test-runner.o\n", + "g++ -std=gnu++11 -shared -L/usr/lib/R/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -o testthat.so init.o reassign.o test-catch.o test-example.o test-runner.o -L/usr/lib/R/lib -lR\n", + "installing to /home/webartifex/repos/urban-meal-delivery/.cache/r_libs/00LOCK-testthat/00new/testthat/libs\n", + "** R\n", + "** inst\n", + "** byte-compile and prepare package for lazy loading\n", + "** help\n", + "*** installing help indices\n", + "*** copying figures\n", + "** building package indices\n", + "** installing vignettes\n", + "** testing if installed package can be loaded from temporary location\n", + "** checking absolute paths in shared objects and dynamic libraries\n", + "** testing if installed package can be loaded from final location\n", + "** testing if installed package keeps a record of temporary installation path\n", + "* DONE (testthat)\n", + "* installing *source* package ‘isoband’ ...\n", + "** package ‘isoband’ successfully unpacked and MD5 sums checked\n", + "** using staged installation\n", + "** libs\n", + "g++ -std=gnu++11 -I\"/usr/share/R/include\" -DNDEBUG -I'/home/webartifex/repos/urban-meal-delivery/.cache/r_libs/testthat/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c clip-lines.cpp -o clip-lines.o\n", + "g++ -std=gnu++11 -I\"/usr/share/R/include\" -DNDEBUG -I'/home/webartifex/repos/urban-meal-delivery/.cache/r_libs/testthat/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c init.cpp -o init.o\n", + "g++ -std=gnu++11 -I\"/usr/share/R/include\" -DNDEBUG -I'/home/webartifex/repos/urban-meal-delivery/.cache/r_libs/testthat/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c isoband.cpp -o isoband.o\n", + "g++ -std=gnu++11 -I\"/usr/share/R/include\" -DNDEBUG -I'/home/webartifex/repos/urban-meal-delivery/.cache/r_libs/testthat/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c polygon.cpp -o polygon.o\n", + "g++ -std=gnu++11 -I\"/usr/share/R/include\" -DNDEBUG -I'/home/webartifex/repos/urban-meal-delivery/.cache/r_libs/testthat/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c separate-polygons.cpp -o separate-polygons.o\n", + "g++ -std=gnu++11 -I\"/usr/share/R/include\" -DNDEBUG -I'/home/webartifex/repos/urban-meal-delivery/.cache/r_libs/testthat/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c test-clip-lines.cpp -o test-clip-lines.o\n", + "g++ -std=gnu++11 -I\"/usr/share/R/include\" -DNDEBUG -I'/home/webartifex/repos/urban-meal-delivery/.cache/r_libs/testthat/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c test-runner.cpp -o test-runner.o\n", + "g++ -std=gnu++11 -I\"/usr/share/R/include\" -DNDEBUG -I'/home/webartifex/repos/urban-meal-delivery/.cache/r_libs/testthat/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c test-separate-polygons.cpp -o test-separate-polygons.o\n", + "g++ -std=gnu++11 -shared -L/usr/lib/R/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -o isoband.so clip-lines.o init.o isoband.o polygon.o separate-polygons.o test-clip-lines.o test-runner.o test-separate-polygons.o -L/usr/lib/R/lib -lR\n", + "installing to /home/webartifex/repos/urban-meal-delivery/.cache/r_libs/00LOCK-isoband/00new/isoband/libs\n", + "** R\n", + "** inst\n", + "** byte-compile and prepare package for lazy loading\n", + "** help\n", + "*** installing help indices\n", + "*** copying figures\n", + "** building package indices\n", + "** installing vignettes\n", + "** testing if installed package can be loaded from temporary location\n", + "** checking absolute paths in shared objects and dynamic libraries\n", + "** testing if installed package can be loaded from final location\n", + "** testing if installed package keeps a record of temporary installation path\n", + "* DONE (isoband)\n", + "* installing *source* package ‘ggplot2’ ...\n", + "** package ‘ggplot2’ successfully unpacked and MD5 sums checked\n", + "** using staged installation\n", + "** R\n", + "** data\n", + "*** moving datasets to lazyload DB\n", + "** inst\n", + "** byte-compile and prepare package for lazy loading\n", + "** help\n", + "*** installing help indices\n", + "*** copying figures\n", + "** building package indices\n", + "** installing vignettes\n", + "** testing if installed package can be loaded from temporary location\n", + "** testing if installed package can be loaded from final location\n", + "** testing if installed package keeps a record of temporary installation path\n", + "* DONE (ggplot2)\n", + "* installing *source* package ‘forecast’ ...\n", + "** package ‘forecast’ successfully unpacked and MD5 sums checked\n", + "** using staged installation\n", + "** libs\n", + "g++ -std=gnu++11 -I\"/usr/share/R/include\" -DNDEBUG -I'/home/webartifex/repos/urban-meal-delivery/.cache/r_libs/Rcpp/include' -I'/home/webartifex/repos/urban-meal-delivery/.cache/r_libs/RcppArmadillo/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c calcBATS.cpp -o calcBATS.o\n", + "g++ -std=gnu++11 -I\"/usr/share/R/include\" -DNDEBUG -I'/home/webartifex/repos/urban-meal-delivery/.cache/r_libs/Rcpp/include' -I'/home/webartifex/repos/urban-meal-delivery/.cache/r_libs/RcppArmadillo/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c calcTBATS.cpp -o calcTBATS.o\n", + "g++ -std=gnu++11 -I\"/usr/share/R/include\" -DNDEBUG -I'/home/webartifex/repos/urban-meal-delivery/.cache/r_libs/Rcpp/include' -I'/home/webartifex/repos/urban-meal-delivery/.cache/r_libs/RcppArmadillo/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c etsTargetFunction.cpp -o etsTargetFunction.o\n", + "g++ -std=gnu++11 -I\"/usr/share/R/include\" -DNDEBUG -I'/home/webartifex/repos/urban-meal-delivery/.cache/r_libs/Rcpp/include' -I'/home/webartifex/repos/urban-meal-delivery/.cache/r_libs/RcppArmadillo/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c etsTargetFunctionWrapper.cpp -o etsTargetFunctionWrapper.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -I'/home/webartifex/repos/urban-meal-delivery/.cache/r_libs/Rcpp/include' -I'/home/webartifex/repos/urban-meal-delivery/.cache/r_libs/RcppArmadillo/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c etscalc.c -o etscalc.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -I'/home/webartifex/repos/urban-meal-delivery/.cache/r_libs/Rcpp/include' -I'/home/webartifex/repos/urban-meal-delivery/.cache/r_libs/RcppArmadillo/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c etspolyroot.c -o etspolyroot.o\n", + "g++ -std=gnu++11 -I\"/usr/share/R/include\" -DNDEBUG -I'/home/webartifex/repos/urban-meal-delivery/.cache/r_libs/Rcpp/include' -I'/home/webartifex/repos/urban-meal-delivery/.cache/r_libs/RcppArmadillo/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c makeBATSMatrices.cpp -o makeBATSMatrices.o\n", + "g++ -std=gnu++11 -I\"/usr/share/R/include\" -DNDEBUG -I'/home/webartifex/repos/urban-meal-delivery/.cache/r_libs/Rcpp/include' -I'/home/webartifex/repos/urban-meal-delivery/.cache/r_libs/RcppArmadillo/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c makeTBATSMatrices.cpp -o makeTBATSMatrices.o\n", + "gcc -std=gnu99 -I\"/usr/share/R/include\" -DNDEBUG -I'/home/webartifex/repos/urban-meal-delivery/.cache/r_libs/Rcpp/include' -I'/home/webartifex/repos/urban-meal-delivery/.cache/r_libs/RcppArmadillo/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c registerDynamicSymbol.c -o registerDynamicSymbol.o\n", + "g++ -std=gnu++11 -I\"/usr/share/R/include\" -DNDEBUG -I'/home/webartifex/repos/urban-meal-delivery/.cache/r_libs/Rcpp/include' -I'/home/webartifex/repos/urban-meal-delivery/.cache/r_libs/RcppArmadillo/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c updateMatrices.cpp -o updateMatrices.o\n", + "g++ -std=gnu++11 -I\"/usr/share/R/include\" -DNDEBUG -I'/home/webartifex/repos/urban-meal-delivery/.cache/r_libs/Rcpp/include' -I'/home/webartifex/repos/urban-meal-delivery/.cache/r_libs/RcppArmadillo/include' -fpic -g -O2 -fdebug-prefix-map=/build/r-base-PsrVor/r-base-4.0.2=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c updateTBATSMatrices.cpp -o updateTBATSMatrices.o\n", + "g++ -std=gnu++11 -shared -L/usr/lib/R/lib -Wl,-Bsymbolic-functions -Wl,-z,relro -o forecast.so calcBATS.o calcTBATS.o etsTargetFunction.o etsTargetFunctionWrapper.o etscalc.o etspolyroot.o makeBATSMatrices.o makeTBATSMatrices.o registerDynamicSymbol.o updateMatrices.o updateTBATSMatrices.o -llapack -lblas -lgfortran -lm -lquadmath -L/usr/lib/R/lib -lR\n", + "installing to /home/webartifex/repos/urban-meal-delivery/.cache/r_libs/00LOCK-forecast/00new/forecast/libs\n", + "** R\n", + "** data\n", + "*** moving datasets to lazyload DB\n", + "** inst\n", + "** byte-compile and prepare package for lazy loading\n", + "** help\n", + "*** installing help indices\n", + "*** copying figures\n", + "** building package indices\n", + "** installing vignettes\n", + "** testing if installed package can be loaded from temporary location\n", + "** checking absolute paths in shared objects and dynamic libraries\n", + "** testing if installed package can be loaded from final location\n", + "** testing if installed package keeps a record of temporary installation path\n", + "* DONE (forecast)\n", + "\n", + "The downloaded source packages are in\n", + "\t‘/tmp/user/1000/RtmpzOhFwP/downloaded_packages’\n", + "> \n", + "> \n" + ] + } + ], + "source": [ + "!R -e \"install.packages('forecast')\"" + ] + }, + { + "cell_type": "markdown", + "metadata": {}, + "source": [ + "Lastly, check if the `urban_meal_delivery.init_r` module can be imported (works only if all R dependencies can be loaded)." + ] + }, + { + "cell_type": "code", + "execution_count": 8, + "metadata": {}, + "outputs": [], + "source": [ + "from urban_meal_delivery import init_r" + ] + } + ], + "metadata": { + "kernelspec": { + "display_name": "Python 3", + "language": "python", + "name": "python3" + }, + "language_info": { + "codemirror_mode": { + "name": "ipython", + "version": 3 + }, + "file_extension": ".py", + "mimetype": "text/x-python", + "name": "python", + "nbconvert_exporter": "python", + "pygments_lexer": "ipython3", + "version": "3.8.6" + } + }, + "nbformat": 4, + "nbformat_minor": 4 +} diff --git a/setup.cfg b/setup.cfg index a7668a8..3e27df5 100644 --- a/setup.cfg +++ b/setup.cfg @@ -255,6 +255,8 @@ ignore_missing_imports = true ignore_missing_imports = true [mypy-pytest] ignore_missing_imports = true +[mypy-rpy2.*] +ignore_missing_imports = true [mypy-sqlalchemy.*] ignore_missing_imports = true [mypy-utm.*] @@ -269,5 +271,6 @@ console_output_style = count env = TESTING=true markers = - db: tests touching the database - e2e: non-db integration tests + db: (integration) tests touching the database + e2e: non-db and non-r integration tests + r: (integration) tests using rpy2 diff --git a/src/urban_meal_delivery/configuration.py b/src/urban_meal_delivery/configuration.py index 2d36392..267d579 100644 --- a/src/urban_meal_delivery/configuration.py +++ b/src/urban_meal_delivery/configuration.py @@ -69,6 +69,8 @@ class Config: ALEMBIC_TABLE = 'alembic_version' ALEMBIC_TABLE_SCHEMA = 'public' + R_LIBS_PATH = os.getenv('R_LIBS') + def __repr__(self) -> str: """Non-literal text representation.""" return '' @@ -117,6 +119,12 @@ def make_config(env: str = 'production') -> Config: if config.DATABASE_URI is None and not os.getenv('TESTING'): warnings.warn('Bad configurartion: no DATABASE_URI set in the environment') + # Some functionalities require R and some packages installed. + # To ensure isolation and reproducibility, the projects keeps the R dependencies + # in a project-local folder that must be set in the environment. + if config.R_LIBS_PATH is None and not os.getenv('TESTING'): + warnings.warn('Bad configuration: no R_LIBS set in the environment') + return config diff --git a/src/urban_meal_delivery/init_r.py b/src/urban_meal_delivery/init_r.py new file mode 100644 index 0000000..189a0dc --- /dev/null +++ b/src/urban_meal_delivery/init_r.py @@ -0,0 +1,28 @@ +"""Initialize the R dependencies. + +The purpose of this module is to import all the R packages that are installed +into a sub-folder (see `config.R_LIBS_PATH`) in the project's root directory. + +The Jupyter notebook "research/r_dependencies.ipynb" can be used to install all +R dependencies on a Ubuntu/Debian based system. +""" + +from rpy2.rinterface_lib import callbacks as rcallbacks +from rpy2.robjects import packages as rpackages + + +# Suppress R's messages to stdout and stderr. +# Source: https://stackoverflow.com/a/63220287 +rcallbacks.consolewrite_print = lambda msg: None # pragma: no cover +rcallbacks.consolewrite_warnerror = lambda msg: None # pragma: no cover + + +# For clarity and convenience, re-raise the error that results from missing R +# dependencies with clearer instructions as to how to deal with it. +try: # noqa:WPS229 + rpackages.importr('forecast') + rpackages.importr('zoo') + +except rpackages.PackageNotInstalledError: # pragma: no cover + msg = 'See the "research/r_dependencies.ipynb" notebook!' + raise rpackages.PackageNotInstalledError(msg) from None diff --git a/tests/test_config.py b/tests/test_config.py index 9251d48..db15321 100644 --- a/tests/test_config.py +++ b/tests/test_config.py @@ -29,6 +29,9 @@ def test_database_uri_set(env, monkeypatch): monkeypatch.setattr(configuration.ProductionConfig, 'DATABASE_URI', uri) monkeypatch.setattr(configuration.TestingConfig, 'DATABASE_URI', uri) + # Prevent that a warning is emitted for a missing R_LIBS_PATH. + monkeypatch.setattr(configuration.Config, 'R_LIBS_PATH', '.cache/r_libs') + with pytest.warns(None) as record: configuration.make_config(env) @@ -43,6 +46,9 @@ def test_no_database_uri_set_with_testing_env_var(env, monkeypatch): monkeypatch.setenv('TESTING', 'true') + # Prevent that a warning is emitted for a missing R_LIBS_PATH. + monkeypatch.setattr(configuration.Config, 'R_LIBS_PATH', '.cache/r_libs') + with pytest.warns(None) as record: configuration.make_config(env) @@ -57,10 +63,64 @@ def test_no_database_uri_set_without_testing_env_var(env, monkeypatch): monkeypatch.delenv('TESTING', raising=False) + # Prevent that a warning is emitted for a missing R_LIBS_PATH. + monkeypatch.setattr(configuration.Config, 'R_LIBS_PATH', '.cache/r_libs') + with pytest.warns(UserWarning, match='no DATABASE_URI'): configuration.make_config(env) +@pytest.mark.parametrize('env', envs) +def test_r_libs_path_set(env, monkeypatch): + """Package does NOT emit a warning if R_LIBS is set in the environment.""" + monkeypatch.setattr(configuration.Config, 'R_LIBS_PATH', '.cache/r_libs') + + # Prevent that a warning is emitted for a missing DATABASE_URI. + uri = 'postgresql://user:password@localhost/db' + monkeypatch.setattr(configuration.ProductionConfig, 'DATABASE_URI', uri) + + with pytest.warns(None) as record: + configuration.make_config(env) + + assert len(record) == 0 # noqa:WPS441,WPS507 + + +@pytest.mark.parametrize('env', envs) +def test_no_r_libs_path_set_with_testing_env_var(env, monkeypatch): + """Package emits a warning if no R_LIBS is set in the environment ... + + ... when not testing. + """ + monkeypatch.setattr(configuration.Config, 'R_LIBS_PATH', None) + monkeypatch.setenv('TESTING', 'true') + + # Prevent that a warning is emitted for a missing DATABASE_URI. + uri = 'postgresql://user:password@localhost/db' + monkeypatch.setattr(configuration.ProductionConfig, 'DATABASE_URI', uri) + + with pytest.warns(None) as record: + configuration.make_config(env) + + assert len(record) == 0 # noqa:WPS441,WPS507 + + +@pytest.mark.parametrize('env', envs) +def test_no_r_libs_path_set_without_testing_env_var(env, monkeypatch): + """Package emits a warning if no R_LIBS is set in the environment ... + + ... when not testing. + """ + monkeypatch.setattr(configuration.Config, 'R_LIBS_PATH', None) + monkeypatch.delenv('TESTING', raising=False) + + # Prevent that a warning is emitted for a missing DATABASE_URI. + uri = 'postgresql://user:password@localhost/db' + monkeypatch.setattr(configuration.ProductionConfig, 'DATABASE_URI', uri) + + with pytest.warns(UserWarning, match='no R_LIBS'): + configuration.make_config(env) + + def test_random_testing_schema(): """CLEAN_SCHEMA is randomized if not set explicitly.""" result = configuration.random_schema_name() diff --git a/tests/test_init_r.py b/tests/test_init_r.py new file mode 100644 index 0000000..be673d6 --- /dev/null +++ b/tests/test_init_r.py @@ -0,0 +1,19 @@ +"""Verify that the R packages are installed correctly.""" + +import pytest + + +@pytest.mark.r +def test_r_packages_installed(): + """Import the `urban_meal_delivery.init_r` module. + + Doing this raises a `PackageNotInstalledError` if the + mentioned R packages are not importable. + + They must be installed externally. That happens either + in the "research/r_dependencies.ipynb" notebook or + in the GitHub Actions CI. + """ + from urban_meal_delivery import init_r # noqa:WPS433 + + assert init_r is not None